Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
RFX1P22670 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.62□□□□□ -1.19
RFX1P22670 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RFX1P22670 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.62□□□□□ -1.19
RFX1P22670 CYP1D1P-201ENST00000416662 1433 ntBASIC7.62□□□□□ -1.19
RFX1P22670 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC7.62□□□□□ -1.19
RFX1P22670 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
RFX1P22670 AC016716.1-201ENST00000265882 708 ntBASIC7.62□□□□□ -1.19
RFX1P22670 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RFX1P22670 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
RFX1P22670 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
RFX1P22670 RNU6-317P-201ENST00000384031 107 ntBASIC7.62□□□□□ -1.19
RFX1P22670 MIR640-201ENST00000385086 96 ntBASIC7.62□□□□□ -1.19
RFX1P22670 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
RFX1P22670 RN7SKP205-201ENST00000410999 307 ntBASIC7.62□□□□□ -1.19
RFX1P22670 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC7.62□□□□□ -1.19
RFX1P22670 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC7.62□□□□□ -1.19
RFX1P22670 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC7.62□□□□□ -1.19
RFX1P22670 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC7.62□□□□□ -1.19
RFX1P22670 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.62□□□□□ -1.19
RFX1P22670 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC7.62□□□□□ -1.19
RFX1P22670 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC7.62□□□□□ -1.19
RFX1P22670 AC135721.2-201ENST00000464237 300 ntBASIC7.62□□□□□ -1.19
RFX1P22670 RPL23AP71-201ENST00000470966 469 ntBASIC7.62□□□□□ -1.19
RFX1P22670 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC7.62□□□□□ -1.19
RFX1P22670 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC7.62□□□□□ -1.19
RFX1P22670 PGBD4P4-201ENST00000509673 613 ntBASIC7.62□□□□□ -1.19
RFX1P22670 IMPA1P1-201ENST00000510718 842 ntBASIC7.62□□□□□ -1.19
RFX1P22670 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC7.62□□□□□ -1.19
RFX1P22670 RN7SKP298-201ENST00000515950 94 ntBASIC7.62□□□□□ -1.19
RFX1P22670 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
RFX1P22670 EEF1B2P2-201ENST00000519625 676 ntBASIC7.62□□□□□ -1.19
RFX1P22670 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC7.62□□□□□ -1.19
RFX1P22670 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC7.62□□□□□ -1.19
RFX1P22670 MTND4LP18-201ENST00000526864 291 ntBASIC7.62□□□□□ -1.19
RFX1P22670 AC024405.1-201ENST00000532521 1042 ntBASIC7.62□□□□□ -1.19
RFX1P22670 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC7.62□□□□□ -1.19
RFX1P22670 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC7.62□□□□□ -1.19
RFX1P22670 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC7.62□□□□□ -1.19
RFX1P22670 AC009063.1-201ENST00000563342 702 ntBASIC7.62□□□□□ -1.19
RFX1P22670 AC136618.2-201ENST00000575091 400 ntBASIC7.62□□□□□ -1.19
RFX1P22670 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.62□□□□□ -1.19
RFX1P22670 MIR548S-201ENST00000581352 82 ntBASIC7.62□□□□□ -1.19
RFX1P22670 AP001004.1-201ENST00000582468 324 ntBASIC7.62□□□□□ -1.19
RFX1P22670 AC083760.1-201ENST00000589621 670 ntBASIC7.62□□□□□ -1.19
RFX1P22670 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC7.62□□□□□ -1.19
RFX1P22670 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC7.62□□□□□ -1.19
RFX1P22670 AC036176.3-201ENST00000602456 418 ntBASIC7.62□□□□□ -1.19
RFX1P22670 AC063962.1-201ENST00000608199 521 ntBASIC7.62□□□□□ -1.19
RFX1P22670 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC7.62□□□□□ -1.19
RFX1P22670 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC7.62□□□□□ -1.19
RFX1P22670 MESTIT1_2.1-201ENST00000616328 235 ntBASIC7.62□□□□□ -1.19
RFX1P22670 AC243756.2-201ENST00000618406 463 ntBASIC7.62□□□□□ -1.19
RFX1P22670 ATE1-AS1-202ENST00000636460 506 ntBASIC7.62□□□□□ -1.19
RFX1P22670 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
RFX1P22670 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.62□□□□□ -1.19
RFX1P22670 AL590763.1-201ENST00000398297 1545 ntBASIC7.62□□□□□ -1.19
RFX1P22670 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
RFX1P22670 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RFX1P22670 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
RFX1P22670 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RFX1P22670 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RFX1P22670 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
RFX1P22670 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.62□□□□□ -1.19
RFX1P22670 EED-206ENST00000527888 1422 ntTSL 2 BASIC7.61□□□□□ -1.19
RFX1P22670 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RFX1P22670 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.61□□□□□ -1.19
RFX1P22670 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
RFX1P22670 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
RFX1P22670 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC7.61□□□□□ -1.19
RFX1P22670 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC7.61□□□□□ -1.19
RFX1P22670 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RFX1P22670 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RFX1P22670 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC7.61□□□□□ -1.19
RFX1P22670 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC7.61□□□□□ -1.19
RFX1P22670 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC7.61□□□□□ -1.19
RFX1P22670 AC008171.1-201ENST00000395058 200 ntBASIC7.61□□□□□ -1.19
RFX1P22670 HMGB3P7-201ENST00000400214 611 ntBASIC7.61□□□□□ -1.19
RFX1P22670 VIM2P-201ENST00000402383 1294 ntBASIC7.61□□□□□ -1.19
RFX1P22670 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RFX1P22670 BOLA3P4-201ENST00000418151 400 ntBASIC7.61□□□□□ -1.19
RFX1P22670 AC093698.1-201ENST00000423843 571 ntBASIC7.61□□□□□ -1.19
RFX1P22670 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC7.61□□□□□ -1.19
RFX1P22670 AC073069.1-201ENST00000428657 441 ntBASIC7.61□□□□□ -1.19
RFX1P22670 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC7.61□□□□□ -1.19
RFX1P22670 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC7.61□□□□□ -1.19
RFX1P22670 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC7.61□□□□□ -1.19
RFX1P22670 FMO7P-201ENST00000436045 768 ntBASIC7.61□□□□□ -1.19
RFX1P22670 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RFX1P22670 CYCSP44-201ENST00000448560 313 ntBASIC7.61□□□□□ -1.19
RFX1P22670 GOT2P2-201ENST00000450663 1251 ntBASIC7.61□□□□□ -1.19
RFX1P22670 ARPC3P2-201ENST00000457786 533 ntBASIC7.61□□□□□ -1.19
RFX1P22670 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC7.61□□□□□ -1.19
RFX1P22670 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC7.61□□□□□ -1.19
RFX1P22670 MYL6P4-201ENST00000477911 453 ntBASIC7.61□□□□□ -1.19
RFX1P22670 RN7SL705P-201ENST00000481678 294 ntBASIC7.61□□□□□ -1.19
RFX1P22670 SUMO2P4-201ENST00000504193 276 ntBASIC7.61□□□□□ -1.19
RFX1P22670 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC7.61□□□□□ -1.19
RFX1P22670 HMGB1P28-201ENST00000507778 552 ntBASIC7.61□□□□□ -1.19
RFX1P22670 RN7SKP244-201ENST00000516513 307 ntBASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms