Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.49□□□□□ -1.69
CTLA4P16410 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.49□□□□□ -1.69
CTLA4P16410 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.49□□□□□ -1.69
CTLA4P16410 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTLA4P16410 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTLA4P16410 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTLA4P16410 RNA5SP435-201ENST00000364044 108 ntBASIC4.48□□□□□ -1.69
CTLA4P16410 AL050305.1-201ENST00000399993 1230 ntBASIC4.48□□□□□ -1.69
CTLA4P16410 PEX12P1-201ENST00000400284 1048 ntBASIC4.48□□□□□ -1.69
CTLA4P16410 SNORA77-201ENST00000408716 125 ntBASIC4.48□□□□□ -1.69
CTLA4P16410 RN7SKP206-201ENST00000410823 293 ntBASIC4.48□□□□□ -1.69
CTLA4P16410 AL445213.1-201ENST00000412589 747 ntBASIC4.48□□□□□ -1.69
CTLA4P16410 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.48□□□□□ -1.69
CTLA4P16410 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.48□□□□□ -1.69
CTLA4P16410 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.48□□□□□ -1.69
CTLA4P16410 RPS29P9-201ENST00000440360 171 ntBASIC4.48□□□□□ -1.69
CTLA4P16410 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.48□□□□□ -1.69
CTLA4P16410 BTF3P6-201ENST00000448054 499 ntBASIC4.48□□□□□ -1.69
CTLA4P16410 AL691482.1-201ENST00000453255 87 ntBASIC4.48□□□□□ -1.69
CTLA4P16410 AL356981.1-201ENST00000454879 684 ntBASIC4.48□□□□□ -1.69
CTLA4P16410 AC093166.2-201ENST00000455969 1017 ntBASIC4.48□□□□□ -1.69
CTLA4P16410 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.48□□□□□ -1.69
CTLA4P16410 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.48□□□□□ -1.69
CTLA4P16410 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.48□□□□□ -1.69
CTLA4P16410 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CTLA4P16410 AC073073.1-201ENST00000493920 463 ntBASIC4.48□□□□□ -1.69
CTLA4P16410 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.48□□□□□ -1.69
CTLA4P16410 AC106872.4-201ENST00000510050 523 ntBASIC4.48□□□□□ -1.69
CTLA4P16410 SNORA70.11-201ENST00000515987 138 ntBASIC4.48□□□□□ -1.69
CTLA4P16410 SNORA70.13-201ENST00000516116 138 ntBASIC4.48□□□□□ -1.69
CTLA4P16410 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC4.48□□□□□ -1.69
CTLA4P16410 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CTLA4P16410 AC116553.2-201ENST00000564203 463 ntBASIC4.48□□□□□ -1.69
CTLA4P16410 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.48□□□□□ -1.69
CTLA4P16410 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.48□□□□□ -1.69
CTLA4P16410 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.48□□□□□ -1.69
CTLA4P16410 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.48□□□□□ -1.69
CTLA4P16410 AC037198.3-201ENST00000616754 526 ntBASIC4.48□□□□□ -1.69
CTLA4P16410 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.48□□□□□ -1.69
CTLA4P16410 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CTLA4P16410 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CTLA4P16410 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.48□□□□□ -1.69
CTLA4P16410 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTLA4P16410 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTLA4P16410 AC003985.2-201ENST00000562268 1669 ntBASIC4.48□□□□□ -1.69
CTLA4P16410 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CTLA4P16410 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CTLA4P16410 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CTLA4P16410 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CTLA4P16410 THAP12P5-201ENST00000405864 2275 ntBASIC4.47□□□□□ -1.69
CTLA4P16410 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.47□□□□□ -1.69
CTLA4P16410 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.47□□□□□ -1.69
CTLA4P16410 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.47□□□□□ -1.69
CTLA4P16410 OR9K1P-202ENST00000641111 3217 ntBASIC4.47□□□□□ -1.69
CTLA4P16410 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTLA4P16410 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.47□□□□□ -1.69
CTLA4P16410 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CTLA4P16410 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CTLA4P16410 LRRC37BP1-201ENST00000398851 714 ntBASIC4.47□□□□□ -1.69
CTLA4P16410 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.47□□□□□ -1.69
CTLA4P16410 AC012512.1-201ENST00000446594 718 ntBASIC4.47□□□□□ -1.69
CTLA4P16410 MORF4L2P1-201ENST00000503761 858 ntBASIC4.47□□□□□ -1.69
CTLA4P16410 RPL7L1P4-201ENST00000513004 707 ntBASIC4.47□□□□□ -1.69
CTLA4P16410 ATP5LP3-201ENST00000514223 304 ntBASIC4.47□□□□□ -1.69
CTLA4P16410 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CTLA4P16410 AC012339.2-201ENST00000523996 453 ntBASIC4.47□□□□□ -1.69
CTLA4P16410 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.47□□□□□ -1.69
CTLA4P16410 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.47□□□□□ -1.69
CTLA4P16410 AP002373.2-201ENST00000541631 1060 ntBASIC4.47□□□□□ -1.69
CTLA4P16410 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.47□□□□□ -1.69
CTLA4P16410 LSM3P2-201ENST00000551246 273 ntBASIC4.47□□□□□ -1.69
CTLA4P16410 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.47□□□□□ -1.69
CTLA4P16410 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CTLA4P16410 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CTLA4P16410 AL512329.2-201ENST00000607350 548 ntBASIC4.47□□□□□ -1.69
CTLA4P16410 AC126915.2-201ENST00000610957 190 ntBASIC4.47□□□□□ -1.69
CTLA4P16410 AC138965.3-201ENST00000623875 498 ntBASIC4.47□□□□□ -1.69
CTLA4P16410 MIR4302-201ENST00000638058 60 ntBASIC4.47□□□□□ -1.69
CTLA4P16410 AC132825.8-201ENST00000640783 297 ntBASIC4.47□□□□□ -1.69
CTLA4P16410 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.47□□□□□ -1.69
CTLA4P16410 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.47□□□□□ -1.69
CTLA4P16410 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.47□□□□□ -1.69
CTLA4P16410 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTLA4P16410 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTLA4P16410 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CTLA4P16410 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTLA4P16410 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.47□□□□□ -1.69
CTLA4P16410 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CTLA4P16410 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
CTLA4P16410 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTLA4P16410 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.69
CTLA4P16410 AC068446.1-201ENST00000556425 1549 ntBASIC4.46□□□□□ -1.69
CTLA4P16410 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.69
CTLA4P16410 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.46□□□□□ -1.69
CTLA4P16410 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.46□□□□□ -1.69
CTLA4P16410 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CTLA4P16410 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CTLA4P16410 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.46□□□□□ -1.69
CTLA4P16410 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CTLA4P16410 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms