Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCL4P13236 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCL4P13236 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCL4P13236 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CCL4P13236 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCL4P13236 AC099654.2-201ENST00000433031 1980 ntBASIC4.78□□□□□ -1.64
CCL4P13236 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CCL4P13236 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCL4P13236 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCL4P13236 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCL4P13236 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCL4P13236 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.78□□□□□ -1.64
CCL4P13236 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CCL4P13236 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC4.78□□□□□ -1.64
CCL4P13236 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.78□□□□□ -1.64
CCL4P13236 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCL4P13236 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.78□□□□□ -1.64
CCL4P13236 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCL4P13236 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCL4P13236 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCL4P13236 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCL4P13236 SNORA2.3-201ENST00000383920 135 ntBASIC4.78□□□□□ -1.64
CCL4P13236 HMGB3P7-201ENST00000400214 611 ntBASIC4.78□□□□□ -1.64
CCL4P13236 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCL4P13236 AC092017.2-201ENST00000427600 362 ntBASIC4.78□□□□□ -1.64
CCL4P13236 AC007559.1-201ENST00000428736 355 ntBASIC4.78□□□□□ -1.64
CCL4P13236 RPL36AP15-201ENST00000444514 266 ntBASIC4.78□□□□□ -1.64
CCL4P13236 AL356390.1-201ENST00000455684 397 ntBASIC4.78□□□□□ -1.64
CCL4P13236 RN7SL354P-201ENST00000469282 294 ntBASIC4.78□□□□□ -1.64
CCL4P13236 AC093720.1-201ENST00000505681 714 ntBASIC4.78□□□□□ -1.64
CCL4P13236 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.78□□□□□ -1.64
CCL4P13236 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.78□□□□□ -1.64
CCL4P13236 AC130364.2-201ENST00000528639 604 ntBASIC4.78□□□□□ -1.64
CCL4P13236 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CCL4P13236 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.78□□□□□ -1.64
CCL4P13236 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.78□□□□□ -1.64
CCL4P13236 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.78□□□□□ -1.64
CCL4P13236 MIR6133-201ENST00000617057 108 ntBASIC4.78□□□□□ -1.64
CCL4P13236 AC000095.2-202ENST00000637415 154 ntBASIC4.78□□□□□ -1.64
CCL4P13236 AC073869.10-201ENST00000642016 354 ntBASIC4.78□□□□□ -1.64
CCL4P13236 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.78□□□□□ -1.64
CCL4P13236 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.78□□□□□ -1.64
CCL4P13236 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCL4P13236 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCL4P13236 GVINP1-202ENST00000531871 7271 ntBASIC4.78□□□□□ -1.64
CCL4P13236 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCL4P13236 AP000547.3-204ENST00000588548 2523 ntBASIC4.78□□□□□ -1.64
CCL4P13236 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC4.78□□□□□ -1.64
CCL4P13236 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC4.78□□□□□ -1.64
CCL4P13236 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCL4P13236 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.77□□□□□ -1.65
CCL4P13236 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CCL4P13236 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCL4P13236 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.77□□□□□ -1.65
CCL4P13236 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.77□□□□□ -1.65
CCL4P13236 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCL4P13236 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCL4P13236 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCL4P13236 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CCL4P13236 SNORA70.6-201ENST00000383934 134 ntBASIC4.77□□□□□ -1.65
CCL4P13236 SNORA77-201ENST00000408716 125 ntBASIC4.77□□□□□ -1.65
CCL4P13236 MTND4LP17-201ENST00000414607 293 ntBASIC4.77□□□□□ -1.65
CCL4P13236 AC119751.6-201ENST00000416712 186 ntBASIC4.77□□□□□ -1.65
CCL4P13236 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.77□□□□□ -1.65
CCL4P13236 AC138761.5-201ENST00000433967 325 ntBASIC4.77□□□□□ -1.65
CCL4P13236 AC093414.1-201ENST00000434712 514 ntBASIC4.77□□□□□ -1.65
CCL4P13236 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCL4P13236 AL513533.1-201ENST00000453728 415 ntBASIC4.77□□□□□ -1.65
CCL4P13236 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.77□□□□□ -1.65
CCL4P13236 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.77□□□□□ -1.65
CCL4P13236 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.77□□□□□ -1.65
CCL4P13236 RNA5SP116-201ENST00000516132 98 ntBASIC4.77□□□□□ -1.65
CCL4P13236 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC4.77□□□□□ -1.65
CCL4P13236 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.77□□□□□ -1.65
CCL4P13236 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.77□□□□□ -1.65
CCL4P13236 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.77□□□□□ -1.65
CCL4P13236 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.77□□□□□ -1.65
CCL4P13236 AL391358.1-201ENST00000605342 190 ntBASIC4.77□□□□□ -1.65
CCL4P13236 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC4.77□□□□□ -1.65
CCL4P13236 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCL4P13236 MIR6839-201ENST00000620425 113 ntBASIC4.77□□□□□ -1.65
CCL4P13236 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCL4P13236 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCL4P13236 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.77□□□□□ -1.65
CCL4P13236 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCL4P13236 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCL4P13236 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.77□□□□□ -1.65
CCL4P13236 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCL4P13236 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CCL4P13236 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCL4P13236 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCL4P13236 AC073365.1-203ENST00000641055 1992 ntBASIC4.76□□□□□ -1.65
CCL4P13236 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCL4P13236 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
CCL4P13236 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCL4P13236 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCL4P13236 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.76□□□□□ -1.65
CCL4P13236 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.76□□□□□ -1.65
CCL4P13236 SNORA70.10-201ENST00000384515 134 ntBASIC4.76□□□□□ -1.65
CCL4P13236 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms