Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.44□□□□□ -1.54
PCNAP12004 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.44□□□□□ -1.54
PCNAP12004 AC112198.4-201ENST00000515450 351 ntBASIC5.44□□□□□ -1.54
PCNAP12004 RPS27AP18-201ENST00000515536 459 ntBASIC5.44□□□□□ -1.54
PCNAP12004 RNA5SP271-201ENST00000516700 88 ntBASIC5.44□□□□□ -1.54
PCNAP12004 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.44□□□□□ -1.54
PCNAP12004 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.44□□□□□ -1.54
PCNAP12004 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
PCNAP12004 AP004609.2-201ENST00000532177 190 ntBASIC5.44□□□□□ -1.54
PCNAP12004 AC068339.2-201ENST00000534395 618 ntBASIC5.44□□□□□ -1.54
PCNAP12004 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.44□□□□□ -1.54
PCNAP12004 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.44□□□□□ -1.54
PCNAP12004 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.44□□□□□ -1.54
PCNAP12004 MIR4660-201ENST00000583549 74 ntBASIC5.44□□□□□ -1.54
PCNAP12004 OR1AB1P-201ENST00000585564 761 ntBASIC5.44□□□□□ -1.54
PCNAP12004 AC007786.3-201ENST00000615154 596 ntBASIC5.44□□□□□ -1.54
PCNAP12004 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
PCNAP12004 AL049777.1-201ENST00000622740 518 ntBASIC5.44□□□□□ -1.54
PCNAP12004 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.44□□□□□ -1.54
PCNAP12004 AC129915.3-201ENST00000634128 948 ntBASIC5.44□□□□□ -1.54
PCNAP12004 TMEM30CP-203ENST00000637814 1035 ntBASIC5.44□□□□□ -1.54
PCNAP12004 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
PCNAP12004 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCNAP12004 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.44□□□□□ -1.54
PCNAP12004 MTND4P9-201ENST00000507819 1346 ntBASIC5.44□□□□□ -1.54
PCNAP12004 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCNAP12004 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCNAP12004 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.44□□□□□ -1.54
PCNAP12004 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCNAP12004 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.44□□□□□ -1.54
PCNAP12004 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.44□□□□□ -1.54
PCNAP12004 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.44□□□□□ -1.54
PCNAP12004 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
PCNAP12004 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.44□□□□□ -1.54
PCNAP12004 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCNAP12004 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCNAP12004 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCNAP12004 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCNAP12004 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.43□□□□□ -1.54
PCNAP12004 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
PCNAP12004 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCNAP12004 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
PCNAP12004 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.43□□□□□ -1.54
PCNAP12004 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCNAP12004 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCNAP12004 OR52B3P-201ENST00000314715 928 ntBASIC5.43□□□□□ -1.54
PCNAP12004 RNU6-609P-201ENST00000365459 107 ntBASIC5.43□□□□□ -1.54
PCNAP12004 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.43□□□□□ -1.54
PCNAP12004 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PCNAP12004 OR7E101P-201ENST00000400428 513 ntBASIC5.43□□□□□ -1.54
PCNAP12004 AC233289.1-201ENST00000403700 508 ntBASIC5.43□□□□□ -1.54
PCNAP12004 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.43□□□□□ -1.54
PCNAP12004 AL022331.1-201ENST00000429025 477 ntBASIC5.43□□□□□ -1.54
PCNAP12004 HMGN1P2-201ENST00000445197 310 ntBASIC5.43□□□□□ -1.54
PCNAP12004 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.43□□□□□ -1.54
PCNAP12004 NXT1P1-201ENST00000458481 316 ntBASIC5.43□□□□□ -1.54
PCNAP12004 RPS17P15-201ENST00000475609 349 ntBASIC5.43□□□□□ -1.54
PCNAP12004 RPSAP51-201ENST00000497462 645 ntBASIC5.43□□□□□ -1.54
PCNAP12004 PSMA2P2-201ENST00000504319 686 ntBASIC5.43□□□□□ -1.54
PCNAP12004 DUTP7-201ENST00000507982 486 ntBASIC5.43□□□□□ -1.54
PCNAP12004 AC021146.7-201ENST00000509604 775 ntBASIC5.43□□□□□ -1.54
PCNAP12004 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.43□□□□□ -1.54
PCNAP12004 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.43□□□□□ -1.54
PCNAP12004 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.43□□□□□ -1.54
PCNAP12004 HMGB1P42-201ENST00000532126 553 ntBASIC5.43□□□□□ -1.54
PCNAP12004 UBTFL9-201ENST00000534504 1148 ntBASIC5.43□□□□□ -1.54
PCNAP12004 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.43□□□□□ -1.54
PCNAP12004 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCNAP12004 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.43□□□□□ -1.54
PCNAP12004 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.43□□□□□ -1.54
PCNAP12004 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.43□□□□□ -1.54
PCNAP12004 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.43□□□□□ -1.54
PCNAP12004 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.43□□□□□ -1.54
PCNAP12004 AL391834.2-201ENST00000609982 546 ntBASIC5.43□□□□□ -1.54
PCNAP12004 AL096712.1-201ENST00000614561 159 ntBASIC5.43□□□□□ -1.54
PCNAP12004 MIR6133-201ENST00000617057 108 ntBASIC5.43□□□□□ -1.54
PCNAP12004 RN7SL544P-201ENST00000617232 284 ntBASIC5.43□□□□□ -1.54
PCNAP12004 AL121890.2-201ENST00000617644 465 ntBASIC5.43□□□□□ -1.54
PCNAP12004 RN7SL763P-201ENST00000620922 284 ntBASIC5.43□□□□□ -1.54
PCNAP12004 AC105105.5-201ENST00000622635 1294 ntBASIC5.43□□□□□ -1.54
PCNAP12004 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.43□□□□□ -1.54
PCNAP12004 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.43□□□□□ -1.54
PCNAP12004 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCNAP12004 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCNAP12004 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.43□□□□□ -1.54
PCNAP12004 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.43□□□□□ -1.54
PCNAP12004 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.43□□□□□ -1.54
PCNAP12004 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.43□□□□□ -1.54
PCNAP12004 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.43□□□□□ -1.54
PCNAP12004 MAPK10-328ENST00000641553 4009 ntBASIC5.43□□□□□ -1.54
PCNAP12004 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.43□□□□□ -1.54
PCNAP12004 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
PCNAP12004 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCNAP12004 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.42□□□□□ -1.54
PCNAP12004 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PCNAP12004 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCNAP12004 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCNAP12004 AC004817.4-201ENST00000602396 3625 ntBASIC5.42□□□□□ -1.54
PCNAP12004 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCNAP12004 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms