Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CXCL1P09341 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CXCL1P09341 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CXCL1P09341 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CXCL1P09341 AC018529.3-201ENST00000624212 2254 ntBASIC3.91□□□□□ -1.78
CXCL1P09341 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.91□□□□□ -1.78
CXCL1P09341 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CXCL1P09341 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC3.91□□□□□ -1.78
CXCL1P09341 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CXCL1P09341 AC008549.2-201ENST00000333482 706 ntBASIC3.91□□□□□ -1.78
CXCL1P09341 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC3.91□□□□□ -1.78
CXCL1P09341 RN7SKP184-201ENST00000362348 333 ntBASIC3.91□□□□□ -1.78
CXCL1P09341 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC3.91□□□□□ -1.78
CXCL1P09341 AL034417.1-201ENST00000399343 800 ntBASIC3.91□□□□□ -1.78
CXCL1P09341 LAP3P1-201ENST00000403648 294 ntBASIC3.91□□□□□ -1.78
CXCL1P09341 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC3.91□□□□□ -1.78
CXCL1P09341 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.91□□□□□ -1.78
CXCL1P09341 ATG4AP1-201ENST00000416893 538 ntBASIC3.91□□□□□ -1.78
CXCL1P09341 AC234781.4-201ENST00000419384 244 ntBASIC3.91□□□□□ -1.78
CXCL1P09341 AC009238.2-201ENST00000431026 355 ntBASIC3.91□□□□□ -1.78
CXCL1P09341 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC3.91□□□□□ -1.78
CXCL1P09341 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC3.91□□□□□ -1.78
CXCL1P09341 AC013410.1-201ENST00000436223 1232 ntBASIC3.91□□□□□ -1.78
CXCL1P09341 AL512637.1-201ENST00000439523 1231 ntBASIC3.91□□□□□ -1.78
CXCL1P09341 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC3.91□□□□□ -1.78
CXCL1P09341 GAPDHP25-201ENST00000447061 1001 ntBASIC3.91□□□□□ -1.78
CXCL1P09341 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC3.91□□□□□ -1.78
CXCL1P09341 AC093166.3-201ENST00000448785 303 ntBASIC3.91□□□□□ -1.78
CXCL1P09341 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC3.91□□□□□ -1.78
CXCL1P09341 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CXCL1P09341 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC3.91□□□□□ -1.78
CXCL1P09341 HSD3BP3-201ENST00000514706 994 ntBASIC3.91□□□□□ -1.78
CXCL1P09341 Y_RNA.667-201ENST00000516212 107 ntBASIC3.91□□□□□ -1.78
CXCL1P09341 SCARNA16.4-201ENST00000516956 187 ntBASIC3.91□□□□□ -1.78
CXCL1P09341 AP003033.2-201ENST00000528901 805 ntBASIC3.91□□□□□ -1.78
CXCL1P09341 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC3.91□□□□□ -1.78
CXCL1P09341 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC3.91□□□□□ -1.78
CXCL1P09341 ATP5J2P6-201ENST00000565203 266 ntBASIC3.91□□□□□ -1.78
CXCL1P09341 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC3.91□□□□□ -1.78
CXCL1P09341 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.91□□□□□ -1.78
CXCL1P09341 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CXCL1P09341 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CXCL1P09341 AC005252.1-201ENST00000604518 1063 ntBASIC3.91□□□□□ -1.78
CXCL1P09341 AC022001.1-201ENST00000605193 268 ntBASIC3.91□□□□□ -1.78
CXCL1P09341 MTCO1P1-201ENST00000624263 1081 ntBASIC3.91□□□□□ -1.78
CXCL1P09341 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.91□□□□□ -1.78
CXCL1P09341 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.91□□□□□ -1.78
CXCL1P09341 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CXCL1P09341 THAP12P8-201ENST00000447914 2115 ntBASIC3.91□□□□□ -1.78
CXCL1P09341 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.91□□□□□ -1.78
CXCL1P09341 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CXCL1P09341 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CXCL1P09341 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CXCL1P09341 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.9□□□□□ -1.78
CXCL1P09341 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
CXCL1P09341 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.9□□□□□ -1.78
CXCL1P09341 AC093909.5-201ENST00000621839 1799 ntBASIC3.9□□□□□ -1.79
CXCL1P09341 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CXCL1P09341 MIR375-201ENST00000362103 64 ntBASIC3.9□□□□□ -1.79
CXCL1P09341 RNA5SP477-201ENST00000362639 119 ntBASIC3.9□□□□□ -1.79
CXCL1P09341 RN7SKP257-201ENST00000364525 309 ntBASIC3.9□□□□□ -1.79
CXCL1P09341 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CXCL1P09341 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CXCL1P09341 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CXCL1P09341 SNORA79B-201ENST00000410557 148 ntBASIC3.9□□□□□ -1.79
CXCL1P09341 PDSS1P1-201ENST00000422953 1114 ntBASIC3.9□□□□□ -1.79
CXCL1P09341 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC3.9□□□□□ -1.79
CXCL1P09341 ZDHHC20P1-204ENST00000435787 423 ntBASIC3.9□□□□□ -1.79
CXCL1P09341 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC3.9□□□□□ -1.79
CXCL1P09341 AC069285.2-201ENST00000440210 275 ntBASIC3.9□□□□□ -1.79
CXCL1P09341 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC3.9□□□□□ -1.79
CXCL1P09341 AC005297.1-201ENST00000444765 862 ntBASIC3.9□□□□□ -1.79
CXCL1P09341 RPL7L1P1-201ENST00000448259 785 ntBASIC3.9□□□□□ -1.79
CXCL1P09341 RN7SL189P-201ENST00000468631 289 ntBASIC3.9□□□□□ -1.79
CXCL1P09341 AC098818.1-201ENST00000478593 252 ntBASIC3.9□□□□□ -1.79
CXCL1P09341 RN7SL423P-201ENST00000486202 304 ntBASIC3.9□□□□□ -1.79
CXCL1P09341 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC3.9□□□□□ -1.79
CXCL1P09341 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.9□□□□□ -1.79
CXCL1P09341 AC025458.1-201ENST00000506046 166 ntBASIC3.9□□□□□ -1.79
CXCL1P09341 OR51K1P-201ENST00000510214 950 ntBASIC3.9□□□□□ -1.79
CXCL1P09341 AC006427.1-201ENST00000514359 712 ntBASIC3.9□□□□□ -1.79
CXCL1P09341 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC3.9□□□□□ -1.79
CXCL1P09341 MYL12AP1-201ENST00000518490 515 ntBASIC3.9□□□□□ -1.79
CXCL1P09341 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC3.9□□□□□ -1.79
CXCL1P09341 EIF4A2P5-201ENST00000529914 499 ntBASIC3.9□□□□□ -1.79
CXCL1P09341 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC3.9□□□□□ -1.79
CXCL1P09341 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC3.9□□□□□ -1.79
CXCL1P09341 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC3.9□□□□□ -1.79
CXCL1P09341 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC3.9□□□□□ -1.79
CXCL1P09341 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC3.9□□□□□ -1.79
CXCL1P09341 AC008126.1-201ENST00000549019 480 ntBASIC3.9□□□□□ -1.79
CXCL1P09341 AP005119.2-201ENST00000579735 1105 ntBASIC3.9□□□□□ -1.79
CXCL1P09341 MYLK-221ENST00000583087 678 ntTSL 4 BASIC3.9□□□□□ -1.79
CXCL1P09341 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC3.9□□□□□ -1.79
CXCL1P09341 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC3.9□□□□□ -1.79
CXCL1P09341 AC073575.2-201ENST00000614212 627 ntBASIC3.9□□□□□ -1.79
CXCL1P09341 AC004232.3-201ENST00000622977 525 ntBASIC3.9□□□□□ -1.79
CXCL1P09341 AC132825.8-201ENST00000640783 297 ntBASIC3.9□□□□□ -1.79
CXCL1P09341 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC3.9□□□□□ -1.79
CXCL1P09341 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms