Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.74□□□□□ -1.65
SPTA1P02549 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.74□□□□□ -1.65
SPTA1P02549 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.74□□□□□ -1.65
SPTA1P02549 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SPTA1P02549 NSF-206ENST00000575068 2667 ntTSL 2 BASIC4.74□□□□□ -1.65
SPTA1P02549 AL627171.1-201ENST00000618845 1308 ntBASIC4.74□□□□□ -1.65
SPTA1P02549 AL731556.1-201ENST00000394628 3711 ntBASIC4.74□□□□□ -1.65
SPTA1P02549 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SPTA1P02549 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SPTA1P02549 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.74□□□□□ -1.65
SPTA1P02549 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
SPTA1P02549 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.74□□□□□ -1.65
SPTA1P02549 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SPTA1P02549 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.74□□□□□ -1.65
SPTA1P02549 RNU1-136P-201ENST00000384181 164 ntBASIC4.74□□□□□ -1.65
SPTA1P02549 PRSS3P4-201ENST00000453323 162 ntBASIC4.74□□□□□ -1.65
SPTA1P02549 OSTCP1-201ENST00000455507 450 ntBASIC4.74□□□□□ -1.65
SPTA1P02549 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.74□□□□□ -1.65
SPTA1P02549 RN7SKP260-201ENST00000516907 149 ntBASIC4.74□□□□□ -1.65
SPTA1P02549 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.74□□□□□ -1.65
SPTA1P02549 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.74□□□□□ -1.65
SPTA1P02549 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.74□□□□□ -1.65
SPTA1P02549 AC020915.5-201ENST00000596836 964 ntBASIC4.74□□□□□ -1.65
SPTA1P02549 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.74□□□□□ -1.65
SPTA1P02549 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.74□□□□□ -1.65
SPTA1P02549 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.74□□□□□ -1.65
SPTA1P02549 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SPTA1P02549 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
SPTA1P02549 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SPTA1P02549 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SPTA1P02549 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.73□□□□□ -1.65
SPTA1P02549 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SPTA1P02549 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
SPTA1P02549 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SPTA1P02549 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
SPTA1P02549 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.73□□□□□ -1.65
SPTA1P02549 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
SPTA1P02549 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.73□□□□□ -1.65
SPTA1P02549 NPM1P33-201ENST00000438918 872 ntBASIC4.73□□□□□ -1.65
SPTA1P02549 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SPTA1P02549 AC010618.1-201ENST00000469924 477 ntBASIC4.73□□□□□ -1.65
SPTA1P02549 AC109327.1-201ENST00000471666 403 ntBASIC4.73□□□□□ -1.65
SPTA1P02549 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.73□□□□□ -1.65
SPTA1P02549 AC140172.1-201ENST00000502928 141 ntBASIC4.73□□□□□ -1.65
SPTA1P02549 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.73□□□□□ -1.65
SPTA1P02549 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.73□□□□□ -1.65
SPTA1P02549 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.73□□□□□ -1.65
SPTA1P02549 AC067852.5-201ENST00000589299 310 ntBASIC4.73□□□□□ -1.65
SPTA1P02549 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
SPTA1P02549 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SPTA1P02549 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SPTA1P02549 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SPTA1P02549 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.73□□□□□ -1.65
SPTA1P02549 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.73□□□□□ -1.65
SPTA1P02549 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SPTA1P02549 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SPTA1P02549 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.73□□□□□ -1.65
SPTA1P02549 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
SPTA1P02549 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.73□□□□□ -1.65
SPTA1P02549 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
SPTA1P02549 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
SPTA1P02549 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC4.73□□□□□ -1.65
SPTA1P02549 RPS27AP12-201ENST00000429552 465 ntBASIC4.73□□□□□ -1.65
SPTA1P02549 RPS29P10-201ENST00000439197 166 ntBASIC4.73□□□□□ -1.65
SPTA1P02549 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.73□□□□□ -1.65
SPTA1P02549 HMGN2P25-201ENST00000486956 268 ntBASIC4.73□□□□□ -1.65
SPTA1P02549 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SPTA1P02549 SCARNA13-201ENST00000516672 275 ntBASIC4.73□□□□□ -1.65
SPTA1P02549 SCARNA20.4-201ENST00000516969 131 ntBASIC4.73□□□□□ -1.65
SPTA1P02549 AC012400.1-201ENST00000518452 381 ntBASIC4.73□□□□□ -1.65
SPTA1P02549 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.73□□□□□ -1.65
SPTA1P02549 OR8G5-201ENST00000524943 1041 ntBASIC4.73□□□□□ -1.65
SPTA1P02549 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.73□□□□□ -1.65
SPTA1P02549 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.73□□□□□ -1.65
SPTA1P02549 PABPC1P8-201ENST00000452851 2086 ntBASIC4.73□□□□□ -1.65
SPTA1P02549 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SPTA1P02549 AC073365.1-203ENST00000641055 1992 ntBASIC4.72□□□□□ -1.65
SPTA1P02549 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.72□□□□□ -1.65
SPTA1P02549 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.72□□□□□ -1.65
SPTA1P02549 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SPTA1P02549 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SPTA1P02549 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.72□□□□□ -1.65
SPTA1P02549 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SPTA1P02549 AC112243.1-201ENST00000623949 3851 ntBASIC4.72□□□□□ -1.65
SPTA1P02549 AC090220.1-201ENST00000593078 1699 ntBASIC4.72□□□□□ -1.65
SPTA1P02549 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SPTA1P02549 AC104162.1-201ENST00000430831 2382 ntBASIC4.72□□□□□ -1.65
SPTA1P02549 TTC41P-205ENST00000551270 3963 ntBASIC4.72□□□□□ -1.65
SPTA1P02549 AC133552.1-201ENST00000569988 4007 ntBASIC4.72□□□□□ -1.65
SPTA1P02549 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.72□□□□□ -1.65
SPTA1P02549 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.72□□□□□ -1.65
SPTA1P02549 RNA5SP464-201ENST00000516251 108 ntBASIC4.72□□□□□ -1.65
SPTA1P02549 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC4.72□□□□□ -1.65
SPTA1P02549 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.72□□□□□ -1.65
SPTA1P02549 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC4.72□□□□□ -1.65
SPTA1P02549 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC4.72□□□□□ -1.65
SPTA1P02549 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SPTA1P02549 MEMO1P5-201ENST00000604810 406 ntBASIC4.72□□□□□ -1.65
SPTA1P02549 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.72□□□□□ -1.65
SPTA1P02549 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms