Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.43□□□□□ -1.54
PDGFBP01127 GAPDHP25-201ENST00000447061 1001 ntBASIC5.43□□□□□ -1.54
PDGFBP01127 MEMO1P4-201ENST00000453590 386 ntBASIC5.43□□□□□ -1.54
PDGFBP01127 AL513533.1-201ENST00000453728 415 ntBASIC5.43□□□□□ -1.54
PDGFBP01127 RPS7P6-201ENST00000485777 579 ntBASIC5.43□□□□□ -1.54
PDGFBP01127 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFBP01127 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.43□□□□□ -1.54
PDGFBP01127 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.43□□□□□ -1.54
PDGFBP01127 UBE2FP2-201ENST00000566646 462 ntBASIC5.43□□□□□ -1.54
PDGFBP01127 AC005341.1-201ENST00000571086 708 ntBASIC5.43□□□□□ -1.54
PDGFBP01127 MIR4284-201ENST00000578924 81 ntBASIC5.43□□□□□ -1.54
PDGFBP01127 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFBP01127 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.43□□□□□ -1.54
PDGFBP01127 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
PDGFBP01127 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.43□□□□□ -1.54
PDGFBP01127 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.43□□□□□ -1.54
PDGFBP01127 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFBP01127 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
PDGFBP01127 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFBP01127 AL078621.3-201ENST00000623707 2042 ntBASIC5.43□□□□□ -1.54
PDGFBP01127 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFBP01127 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFBP01127 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
PDGFBP01127 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.43□□□□□ -1.54
PDGFBP01127 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFBP01127 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.42□□□□□ -1.54
PDGFBP01127 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.42□□□□□ -1.54
PDGFBP01127 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFBP01127 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.42□□□□□ -1.54
PDGFBP01127 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.42□□□□□ -1.54
PDGFBP01127 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFBP01127 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFBP01127 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFBP01127 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
PDGFBP01127 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFBP01127 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFBP01127 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.42□□□□□ -1.54
PDGFBP01127 RNA5SP332-201ENST00000391063 115 ntBASIC5.42□□□□□ -1.54
PDGFBP01127 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.42□□□□□ -1.54
PDGFBP01127 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.42□□□□□ -1.54
PDGFBP01127 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
PDGFBP01127 HMGB3P14-201ENST00000494195 599 ntBASIC5.42□□□□□ -1.54
PDGFBP01127 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.42□□□□□ -1.54
PDGFBP01127 GTF2F2P1-201ENST00000511083 675 ntBASIC5.42□□□□□ -1.54
PDGFBP01127 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.42□□□□□ -1.54
PDGFBP01127 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.42□□□□□ -1.54
PDGFBP01127 OR4A6P-201ENST00000534364 970 ntBASIC5.42□□□□□ -1.54
PDGFBP01127 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.42□□□□□ -1.54
PDGFBP01127 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.42□□□□□ -1.54
PDGFBP01127 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.42□□□□□ -1.54
PDGFBP01127 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.42□□□□□ -1.54
PDGFBP01127 MTND2P13-201ENST00000577438 1039 ntBASIC5.42□□□□□ -1.54
PDGFBP01127 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.42□□□□□ -1.54
PDGFBP01127 MIR5096-201ENST00000583713 70 ntBASIC5.42□□□□□ -1.54
PDGFBP01127 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.42□□□□□ -1.54
PDGFBP01127 AL392048.1-201ENST00000613946 534 ntBASIC5.42□□□□□ -1.54
PDGFBP01127 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.42□□□□□ -1.54
PDGFBP01127 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.42□□□□□ -1.54
PDGFBP01127 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFBP01127 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFBP01127 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFBP01127 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
PDGFBP01127 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PDGFBP01127 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFBP01127 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.42□□□□□ -1.54
PDGFBP01127 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.42□□□□□ -1.54
PDGFBP01127 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PDGFBP01127 AC003973.3-201ENST00000624863 2822 ntBASIC5.42□□□□□ -1.54
PDGFBP01127 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
PDGFBP01127 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFBP01127 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFBP01127 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PDGFBP01127 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDGFBP01127 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDGFBP01127 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.41□□□□□ -1.54
PDGFBP01127 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.41□□□□□ -1.54
PDGFBP01127 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDGFBP01127 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
PDGFBP01127 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDGFBP01127 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.41□□□□□ -1.54
PDGFBP01127 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PDGFBP01127 RNA5SP326-201ENST00000363209 110 ntBASIC5.41□□□□□ -1.54
PDGFBP01127 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PDGFBP01127 AL049693.1-201ENST00000402760 611 ntBASIC5.41□□□□□ -1.54
PDGFBP01127 AC004690.1-201ENST00000418216 328 ntBASIC5.41□□□□□ -1.54
PDGFBP01127 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.41□□□□□ -1.54
PDGFBP01127 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.41□□□□□ -1.54
PDGFBP01127 FCF1P7-201ENST00000451185 558 ntBASIC5.41□□□□□ -1.54
PDGFBP01127 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.41□□□□□ -1.54
PDGFBP01127 OSTCP1-201ENST00000455507 450 ntBASIC5.41□□□□□ -1.54
PDGFBP01127 RN7SL41P-201ENST00000476144 297 ntBASIC5.41□□□□□ -1.54
PDGFBP01127 HMGN2P25-201ENST00000486956 268 ntBASIC5.41□□□□□ -1.54
PDGFBP01127 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.41□□□□□ -1.54
PDGFBP01127 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDGFBP01127 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.41□□□□□ -1.54
PDGFBP01127 AC026402.1-201ENST00000513642 170 ntBASIC5.41□□□□□ -1.54
PDGFBP01127 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.41□□□□□ -1.54
PDGFBP01127 RN7SKP67-201ENST00000515905 235 ntBASIC5.41□□□□□ -1.54
PDGFBP01127 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.41□□□□□ -1.54
PDGFBP01127 AP001804.1-201ENST00000526868 919 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms