Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.9□□□□□ -1.46
CNOT4O95628 MOB1AP1-201ENST00000430903 535 ntBASIC5.9□□□□□ -1.46
CNOT4O95628 RPS24P1-201ENST00000438550 371 ntBASIC5.9□□□□□ -1.46
CNOT4O95628 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.9□□□□□ -1.46
CNOT4O95628 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC5.9□□□□□ -1.46
CNOT4O95628 AC007383.1-201ENST00000445875 636 ntBASIC5.9□□□□□ -1.46
CNOT4O95628 AL035551.1-201ENST00000446931 348 ntBASIC5.9□□□□□ -1.46
CNOT4O95628 MTCYBP1-201ENST00000454315 1119 ntBASIC5.9□□□□□ -1.46
CNOT4O95628 AC084754.1-201ENST00000463466 464 ntBASIC5.9□□□□□ -1.46
CNOT4O95628 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC5.9□□□□□ -1.46
CNOT4O95628 AC092045.1-201ENST00000495716 1231 ntBASIC5.9□□□□□ -1.46
CNOT4O95628 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.9□□□□□ -1.46
CNOT4O95628 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.9□□□□□ -1.46
CNOT4O95628 AC021146.8-201ENST00000507455 733 ntBASIC5.9□□□□□ -1.46
CNOT4O95628 AC008565.1-201ENST00000509046 885 ntBASIC5.9□□□□□ -1.46
CNOT4O95628 AC008885.2-201ENST00000509506 930 ntBASIC5.9□□□□□ -1.46
CNOT4O95628 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.9□□□□□ -1.46
CNOT4O95628 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.9□□□□□ -1.46
CNOT4O95628 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.9□□□□□ -1.46
CNOT4O95628 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.9□□□□□ -1.46
CNOT4O95628 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.9□□□□□ -1.46
CNOT4O95628 AC092851.1-201ENST00000535964 478 ntBASIC5.9□□□□□ -1.46
CNOT4O95628 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.9□□□□□ -1.46
CNOT4O95628 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC5.9□□□□□ -1.46
CNOT4O95628 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.9□□□□□ -1.46
CNOT4O95628 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.9□□□□□ -1.46
CNOT4O95628 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.9□□□□□ -1.46
CNOT4O95628 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.9□□□□□ -1.46
CNOT4O95628 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.9□□□□□ -1.46
CNOT4O95628 AP003115.1-201ENST00000569849 463 ntBASIC5.9□□□□□ -1.46
CNOT4O95628 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.9□□□□□ -1.46
CNOT4O95628 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.9□□□□□ -1.46
CNOT4O95628 AC125494.3-201ENST00000602759 455 ntBASIC5.9□□□□□ -1.46
CNOT4O95628 AL136363.2-201ENST00000604173 851 ntBASIC5.9□□□□□ -1.46
CNOT4O95628 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC5.9□□□□□ -1.46
CNOT4O95628 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.9□□□□□ -1.46
CNOT4O95628 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CNOT4O95628 OR1N1-202ENST00000619659 939 ntBASIC5.9□□□□□ -1.46
CNOT4O95628 AL035661.1-201ENST00000620459 1144 ntBASIC5.9□□□□□ -1.46
CNOT4O95628 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.9□□□□□ -1.46
CNOT4O95628 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CNOT4O95628 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CNOT4O95628 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.47
CNOT4O95628 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
CNOT4O95628 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.9□□□□□ -1.47
CNOT4O95628 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.9□□□□□ -1.47
CNOT4O95628 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
CNOT4O95628 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.47
CNOT4O95628 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CNOT4O95628 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC5.9□□□□□ -1.47
CNOT4O95628 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.9□□□□□ -1.47
CNOT4O95628 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.9□□□□□ -1.47
CNOT4O95628 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CNOT4O95628 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CNOT4O95628 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.9□□□□□ -1.47
CNOT4O95628 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
CNOT4O95628 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
CNOT4O95628 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
CNOT4O95628 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.9□□□□□ -1.47
CNOT4O95628 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CNOT4O95628 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC5.89□□□□□ -1.47
CNOT4O95628 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CNOT4O95628 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.89□□□□□ -1.47
CNOT4O95628 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CNOT4O95628 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CNOT4O95628 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CNOT4O95628 ASNSP6-201ENST00000592770 1618 ntBASIC5.89□□□□□ -1.47
CNOT4O95628 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CNOT4O95628 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CNOT4O95628 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CNOT4O95628 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CNOT4O95628 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
CNOT4O95628 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
CNOT4O95628 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.89□□□□□ -1.47
CNOT4O95628 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.89□□□□□ -1.47
CNOT4O95628 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
CNOT4O95628 AC008957.3-201ENST00000624112 2242 ntBASIC5.89□□□□□ -1.47
CNOT4O95628 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CNOT4O95628 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CNOT4O95628 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CNOT4O95628 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CNOT4O95628 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.89□□□□□ -1.47
CNOT4O95628 Y_RNA.6-201ENST00000362350 114 ntBASIC5.89□□□□□ -1.47
CNOT4O95628 RNA5SP308-201ENST00000362532 115 ntBASIC5.89□□□□□ -1.47
CNOT4O95628 RNA5SP140-201ENST00000364524 92 ntBASIC5.89□□□□□ -1.47
CNOT4O95628 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.89□□□□□ -1.47
CNOT4O95628 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CNOT4O95628 MRPS6P2-201ENST00000381143 370 ntBASIC5.89□□□□□ -1.47
CNOT4O95628 Y_RNA.553-201ENST00000384670 102 ntBASIC5.89□□□□□ -1.47
CNOT4O95628 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CNOT4O95628 AL590635.1-201ENST00000406314 586 ntBASIC5.89□□□□□ -1.47
CNOT4O95628 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CNOT4O95628 RN7SKP166-201ENST00000410812 305 ntBASIC5.89□□□□□ -1.47
CNOT4O95628 RN7SKP273-201ENST00000411392 314 ntBASIC5.89□□□□□ -1.47
CNOT4O95628 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC5.89□□□□□ -1.47
CNOT4O95628 AL359092.1-201ENST00000417156 265 ntBASIC5.89□□□□□ -1.47
CNOT4O95628 AC006960.1-201ENST00000419980 153 ntBASIC5.89□□□□□ -1.47
CNOT4O95628 AC012519.1-201ENST00000424588 610 ntBASIC5.89□□□□□ -1.47
CNOT4O95628 AL139158.1-201ENST00000424719 340 ntBASIC5.89□□□□□ -1.47
CNOT4O95628 RPSAP32-201ENST00000432681 526 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms