Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 MIR142-201ENST00000384835 87 ntBASIC7.02□□□□□ -1.29
SOX1O00570 MRM2-202ENST00000407040 582 ntTSL 3 BASIC7.02□□□□□ -1.29
SOX1O00570 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SOX1O00570 AC010385.1-201ENST00000412374 256 ntBASIC7.02□□□□□ -1.29
SOX1O00570 SDHDP6-201ENST00000414693 480 ntBASIC7.02□□□□□ -1.29
SOX1O00570 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC7.02□□□□□ -1.29
SOX1O00570 AC007435.1-201ENST00000421086 415 ntBASIC7.02□□□□□ -1.29
SOX1O00570 CDY14P-201ENST00000431260 1014 ntBASIC7.02□□□□□ -1.29
SOX1O00570 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SOX1O00570 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC7.02□□□□□ -1.29
SOX1O00570 LARP1BP3-201ENST00000437229 869 ntBASIC7.02□□□□□ -1.29
SOX1O00570 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC7.02□□□□□ -1.29
SOX1O00570 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC7.02□□□□□ -1.29
SOX1O00570 AC097499.1-201ENST00000444277 208 ntBASIC7.02□□□□□ -1.29
SOX1O00570 YWHABP1-201ENST00000445359 727 ntBASIC7.02□□□□□ -1.29
SOX1O00570 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC7.02□□□□□ -1.29
SOX1O00570 CDY23P-201ENST00000451661 1014 ntBASIC7.02□□□□□ -1.29
SOX1O00570 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC7.02□□□□□ -1.29
SOX1O00570 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7.02□□□□□ -1.29
SOX1O00570 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC7.02□□□□□ -1.29
SOX1O00570 AC104849.1-201ENST00000462623 405 ntBASIC7.02□□□□□ -1.29
SOX1O00570 RPL5P13-201ENST00000462840 709 ntBASIC7.02□□□□□ -1.29
SOX1O00570 TMED11P-201ENST00000479478 690 ntBASIC7.02□□□□□ -1.29
SOX1O00570 RPL23AP37-201ENST00000479658 549 ntBASIC7.02□□□□□ -1.29
SOX1O00570 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC7.02□□□□□ -1.29
SOX1O00570 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC7.02□□□□□ -1.29
SOX1O00570 IGBP1P5-201ENST00000507524 1000 ntBASIC7.02□□□□□ -1.29
SOX1O00570 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC7.02□□□□□ -1.29
SOX1O00570 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC7.02□□□□□ -1.29
SOX1O00570 TCP11X3P-202ENST00000514289 1254 ntBASIC7.02□□□□□ -1.29
SOX1O00570 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC7.02□□□□□ -1.29
SOX1O00570 OR8Q1P-201ENST00000526467 655 ntBASIC7.02□□□□□ -1.29
SOX1O00570 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC7.02□□□□□ -1.29
SOX1O00570 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC7.02□□□□□ -1.29
SOX1O00570 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC7.02□□□□□ -1.29
SOX1O00570 APPL2-203ENST00000546731 684 ntTSL 2 BASIC7.02□□□□□ -1.29
SOX1O00570 AC079600.1-201ENST00000550326 297 ntBASIC7.02□□□□□ -1.29
SOX1O00570 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC7.02□□□□□ -1.29
SOX1O00570 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.02□□□□□ -1.29
SOX1O00570 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
SOX1O00570 RN7SL475P-201ENST00000583379 298 ntBASIC7.02□□□□□ -1.29
SOX1O00570 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC7.02□□□□□ -1.29
SOX1O00570 VN1R92P-201ENST00000598511 928 ntBASIC7.02□□□□□ -1.29
SOX1O00570 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SOX1O00570 AC078795.3-201ENST00000602913 472 ntBASIC7.02□□□□□ -1.29
SOX1O00570 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.02□□□□□ -1.29
SOX1O00570 AC099063.3-201ENST00000642066 185 ntBASIC7.02□□□□□ -1.29
SOX1O00570 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SOX1O00570 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
SOX1O00570 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SOX1O00570 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.02□□□□□ -1.29
SOX1O00570 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.02□□□□□ -1.29
SOX1O00570 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
SOX1O00570 ZSWIM5P3-201ENST00000511265 2743 ntBASIC7.02□□□□□ -1.29
SOX1O00570 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SOX1O00570 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.02□□□□□ -1.29
SOX1O00570 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.02□□□□□ -1.29
SOX1O00570 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
SOX1O00570 PHF2P2-202ENST00000444553 2865 ntBASIC7.02□□□□□ -1.29
SOX1O00570 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC7.02□□□□□ -1.29
SOX1O00570 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.02□□□□□ -1.29
SOX1O00570 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SOX1O00570 ELF2P3-201ENST00000445099 1506 ntBASIC7.01□□□□□ -1.29
SOX1O00570 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC7.01□□□□□ -1.29
SOX1O00570 AC090771.1-201ENST00000585803 1618 ntBASIC7.01□□□□□ -1.29
SOX1O00570 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.01□□□□□ -1.29
SOX1O00570 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SOX1O00570 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.01□□□□□ -1.29
SOX1O00570 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
SOX1O00570 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.01□□□□□ -1.29
SOX1O00570 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
SOX1O00570 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SOX1O00570 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.01□□□□□ -1.29
SOX1O00570 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SOX1O00570 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SOX1O00570 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SOX1O00570 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC7.01□□□□□ -1.29
SOX1O00570 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC7.01□□□□□ -1.29
SOX1O00570 TPT1P2-201ENST00000413105 503 ntBASIC7.01□□□□□ -1.29
SOX1O00570 VTA1P1-201ENST00000414044 866 ntBASIC7.01□□□□□ -1.29
SOX1O00570 RPL7P30-201ENST00000420888 709 ntBASIC7.01□□□□□ -1.29
SOX1O00570 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC7.01□□□□□ -1.29
SOX1O00570 MTCO1P3-201ENST00000429327 192 ntBASIC7.01□□□□□ -1.29
SOX1O00570 MTND4LP16-201ENST00000440828 295 ntBASIC7.01□□□□□ -1.29
SOX1O00570 DDX39BP2-208ENST00000453923 258 ntBASIC7.01□□□□□ -1.29
SOX1O00570 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SOX1O00570 XACT-201ENST00000468762 497 ntTSL 5 BASIC7.01□□□□□ -1.29
SOX1O00570 RPL19P11-201ENST00000495944 589 ntBASIC7.01□□□□□ -1.29
SOX1O00570 OR5H5P-201ENST00000503164 928 ntBASIC7.01□□□□□ -1.29
SOX1O00570 AC006499.5-201ENST00000505037 514 ntBASIC7.01□□□□□ -1.29
SOX1O00570 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC7.01□□□□□ -1.29
SOX1O00570 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
SOX1O00570 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC7.01□□□□□ -1.29
SOX1O00570 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC7.01□□□□□ -1.29
SOX1O00570 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC7.01□□□□□ -1.29
SOX1O00570 KCTD9P4-201ENST00000526766 1166 ntBASIC7.01□□□□□ -1.29
SOX1O00570 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SOX1O00570 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC7.01□□□□□ -1.29
SOX1O00570 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.01□□□□□ -1.29
SOX1O00570 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms