Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 RN7SKP149-201ENST00000363008 344 ntBASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 ATP5HP3-201ENST00000396994 486 ntBASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 RPL12P9-201ENST00000412942 488 ntBASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 KATNBL1P2-201ENST00000433311 835 ntBASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 AL049745.1-201ENST00000433953 286 ntBASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 AC046176.1-201ENST00000435260 1170 ntBASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 AC112498.1-201ENST00000444401 332 ntBASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 AC091685.2-201ENST00000454924 864 ntBASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 AC091180.1-201ENST00000462104 372 ntBASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 AC083982.1-201ENST00000485679 344 ntBASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 RPS23P1-201ENST00000491662 432 ntBASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 RN7SL441P-201ENST00000492388 296 ntBASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 AC012339.2-201ENST00000523996 453 ntBASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 GTF2IP11-201ENST00000526931 420 ntBASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 EDDM3DP-201ENST00000554692 434 ntBASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 MIR4700-201ENST00000578311 74 ntBASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 AC010809.3-201ENST00000621310 641 ntBASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 AC090220.1-201ENST00000593078 1699 ntBASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 AL450345.1-202ENST00000605741 3881 ntBASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 Z80107.2-201ENST00000445127 392 ntBASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 AC004980.3-201ENST00000447046 365 ntBASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 AC092324.1-201ENST00000468671 324 ntBASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 AC105420.1-201ENST00000504389 582 ntBASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 AC009117.1-201ENST00000563948 554 ntBASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 EIF1P5-201ENST00000585002 234 ntBASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 AP001521.2-201ENST00000608772 546 ntBASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 AC026367.3-201ENST00000619032 590 ntBASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 AC092451.3-201ENST00000625067 1343 ntBASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 AC140134.1-201ENST00000511830 3544 ntBASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 BX284613.1-201ENST00000452221 1641 ntBASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms