Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 RN7SL790P-201ENST00000474043 298 ntBASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 SEPT14P4-201ENST00000513445 186 ntBASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 IGLVIV-59-201ENST00000520218 250 ntBASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 FO082796.1-201ENST00000523795 183 ntBASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 AC126177.6-201ENST00000550420 1009 ntBASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 GNG2-215ENST00000557376 573 ntTSL 4 BASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 AL157394.1-201ENST00000562983 1224 ntBASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 AL390195.2-201ENST00000564771 2023 ntBASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 AC018638.8-201ENST00000588755 281 ntBASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 AC113361.1-201ENST00000606683 543 ntBASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 RN7SL715P-201ENST00000606972 286 ntBASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 RNU6-84P-201ENST00000607737 102 ntBASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 AC245407.2-201ENST00000614199 451 ntBASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 AL157359.3-201ENST00000623771 217 ntBASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 AC005753.1-201ENST00000623837 618 ntBASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 BCL6-201ENST00000232014 2710 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LIMD1Q9UGP4 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 MAPK10-347ENST00000641762 2856 ntBASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 Y_RNA.157-201ENST00000363638 102 ntBASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 RPS3AP5-201ENST00000389400 821 ntBASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 RNA5SP23-201ENST00000391006 105 ntBASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 MAST4-207ENST00000407621 559 ntTSL 2 BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 RNU6-195P-201ENST00000411352 109 ntBASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 AC211486.3-201ENST00000412694 621 ntBASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 RBMY2KP-201ENST00000418221 992 ntBASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 MTCO2P12-201ENST00000427426 682 ntBASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 OR4F13P-201ENST00000428478 931 ntBASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 LINC00328-2P-201ENST00000436585 219 ntBASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 LSM1P1-201ENST00000438629 273 ntBASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 GOT2P2-201ENST00000450663 1251 ntBASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 AL161747.1-201ENST00000480068 358 ntBASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 FAM172BP-201ENST00000487497 1089 ntBASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 Y_RNA.672-201ENST00000516289 104 ntBASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 AP000790.1-201ENST00000528891 737 ntBASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 OR4A12P-201ENST00000530847 918 ntBASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 AC079598.4-201ENST00000549647 265 ntBASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 AC107954.1-201ENST00000565906 727 ntBASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 AC034268.2-201ENST00000571784 482 ntBASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 MIR5186-201ENST00000577504 120 ntBASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 AC015917.1-201ENST00000579654 510 ntBASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 AL161734.1-201ENST00000609720 557 ntBASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 AL451054.1-201ENST00000621770 772 ntBASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 AC009268.2-201ENST00000621925 457 ntBASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 AC006328.2-201ENST00000623198 397 ntBASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 AC012005.2-201ENST00000624333 397 ntBASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 MIR193BHG-214ENST00000641765 509 ntBASIC7.81□□□□□ -1.16
LIMD1Q9UGP4 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms