Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.23□□□□□ -1.41
COL20A1Q9P218 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.23□□□□□ -1.41
COL20A1Q9P218 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC6.23□□□□□ -1.41
COL20A1Q9P218 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.23□□□□□ -1.41
COL20A1Q9P218 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC6.23□□□□□ -1.41
COL20A1Q9P218 MRPS21P3-201ENST00000436696 262 ntBASIC6.23□□□□□ -1.41
COL20A1Q9P218 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
COL20A1Q9P218 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.23□□□□□ -1.41
COL20A1Q9P218 FAR2P1-206ENST00000449736 709 ntBASIC6.23□□□□□ -1.41
COL20A1Q9P218 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL20A1Q9P218 AZGP1P2-201ENST00000454506 345 ntBASIC6.23□□□□□ -1.41
COL20A1Q9P218 ATP5LP5-201ENST00000483050 299 ntBASIC6.23□□□□□ -1.41
COL20A1Q9P218 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.23□□□□□ -1.41
COL20A1Q9P218 NAMPTP2-201ENST00000505629 1115 ntBASIC6.23□□□□□ -1.41
COL20A1Q9P218 ST13P12-201ENST00000508958 1094 ntBASIC6.23□□□□□ -1.41
COL20A1Q9P218 AC021146.7-201ENST00000509604 775 ntBASIC6.23□□□□□ -1.41
COL20A1Q9P218 MTCO3P27-201ENST00000514397 196 ntBASIC6.23□□□□□ -1.41
COL20A1Q9P218 AC034244.2-201ENST00000514668 858 ntBASIC6.23□□□□□ -1.41
COL20A1Q9P218 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC6.23□□□□□ -1.41
COL20A1Q9P218 AP003355.1-201ENST00000518956 587 ntBASIC6.23□□□□□ -1.41
COL20A1Q9P218 OR5AM1P-201ENST00000532136 1032 ntBASIC6.23□□□□□ -1.41
COL20A1Q9P218 AC122688.1-201ENST00000541494 223 ntBASIC6.23□□□□□ -1.41
COL20A1Q9P218 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.23□□□□□ -1.41
COL20A1Q9P218 RPL10P14-201ENST00000565265 298 ntBASIC6.23□□□□□ -1.41
COL20A1Q9P218 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC6.23□□□□□ -1.41
COL20A1Q9P218 AP000769.2-201ENST00000602344 396 ntBASIC6.23□□□□□ -1.41
COL20A1Q9P218 MTCO2P22-201ENST00000603246 681 ntBASIC6.23□□□□□ -1.41
COL20A1Q9P218 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL20A1Q9P218 ZNF90P1-201ENST00000480493 1951 ntBASIC6.23□□□□□ -1.41
COL20A1Q9P218 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL20A1Q9P218 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
COL20A1Q9P218 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL20A1Q9P218 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL20A1Q9P218 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL20A1Q9P218 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
COL20A1Q9P218 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.23□□□□□ -1.41
COL20A1Q9P218 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.23□□□□□ -1.41
COL20A1Q9P218 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL20A1Q9P218 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
COL20A1Q9P218 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
COL20A1Q9P218 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
COL20A1Q9P218 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
COL20A1Q9P218 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL20A1Q9P218 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL20A1Q9P218 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.22□□□□□ -1.41
COL20A1Q9P218 DDX18P6-201ENST00000450119 1997 ntBASIC6.22□□□□□ -1.41
COL20A1Q9P218 AC007159.1-201ENST00000566529 4706 ntBASIC6.22□□□□□ -1.41
COL20A1Q9P218 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL20A1Q9P218 AC116158.1-201ENST00000560231 2129 ntBASIC6.22□□□□□ -1.41
COL20A1Q9P218 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL20A1Q9P218 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.22□□□□□ -1.41
COL20A1Q9P218 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
COL20A1Q9P218 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL20A1Q9P218 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL20A1Q9P218 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC6.22□□□□□ -1.41
COL20A1Q9P218 MTCYBP32-201ENST00000427945 1084 ntBASIC6.22□□□□□ -1.41
COL20A1Q9P218 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.22□□□□□ -1.41
COL20A1Q9P218 AL512661.1-201ENST00000434586 1253 ntBASIC6.22□□□□□ -1.41
COL20A1Q9P218 GSTM5P1-201ENST00000434751 660 ntBASIC6.22□□□□□ -1.41
COL20A1Q9P218 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC6.22□□□□□ -1.41
COL20A1Q9P218 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.22□□□□□ -1.41
COL20A1Q9P218 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.22□□□□□ -1.41
COL20A1Q9P218 AURKAPS1-201ENST00000451805 1212 ntBASIC6.22□□□□□ -1.41
COL20A1Q9P218 BX284632.1-201ENST00000478218 541 ntBASIC6.22□□□□□ -1.41
COL20A1Q9P218 SETP6-201ENST00000479329 568 ntBASIC6.22□□□□□ -1.41
COL20A1Q9P218 AC093270.2-201ENST00000486157 792 ntBASIC6.22□□□□□ -1.41
COL20A1Q9P218 OR5M14P-201ENST00000506803 618 ntBASIC6.22□□□□□ -1.41
COL20A1Q9P218 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC6.22□□□□□ -1.41
COL20A1Q9P218 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.22□□□□□ -1.41
COL20A1Q9P218 GAPDHP62-201ENST00000515313 990 ntBASIC6.22□□□□□ -1.41
COL20A1Q9P218 RNU5A-7P-201ENST00000515979 116 ntBASIC6.22□□□□□ -1.41
COL20A1Q9P218 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC6.22□□□□□ -1.41
COL20A1Q9P218 AP004607.2-201ENST00000533949 322 ntBASIC6.22□□□□□ -1.41
COL20A1Q9P218 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC6.22□□□□□ -1.41
COL20A1Q9P218 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC6.22□□□□□ -1.41
COL20A1Q9P218 AC021483.2-201ENST00000567415 758 ntBASIC6.22□□□□□ -1.41
COL20A1Q9P218 AC009237.13-201ENST00000603193 276 ntBASIC6.22□□□□□ -1.41
COL20A1Q9P218 AL445222.1-201ENST00000607259 628 ntBASIC6.22□□□□□ -1.41
COL20A1Q9P218 RNU6-84P-201ENST00000607737 102 ntBASIC6.22□□□□□ -1.41
COL20A1Q9P218 AC211433.2-201ENST00000608433 387 ntBASIC6.22□□□□□ -1.41
COL20A1Q9P218 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.22□□□□□ -1.41
COL20A1Q9P218 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.22□□□□□ -1.41
COL20A1Q9P218 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.22□□□□□ -1.41
COL20A1Q9P218 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL20A1Q9P218 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL20A1Q9P218 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL20A1Q9P218 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.22□□□□□ -1.41
COL20A1Q9P218 OR4F13P-202ENST00000560066 2054 ntBASIC6.22□□□□□ -1.41
COL20A1Q9P218 AC006206.1-201ENST00000544842 3387 ntBASIC6.22□□□□□ -1.41
COL20A1Q9P218 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL20A1Q9P218 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL20A1Q9P218 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.22□□□□□ -1.41
COL20A1Q9P218 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
COL20A1Q9P218 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.22□□□□□ -1.41
COL20A1Q9P218 AC012078.1-201ENST00000405035 1646 ntBASIC6.21□□□□□ -1.41
COL20A1Q9P218 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.21□□□□□ -1.41
COL20A1Q9P218 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
COL20A1Q9P218 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.21□□□□□ -1.41
COL20A1Q9P218 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
COL20A1Q9P218 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms