Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 CBX1P1-201ENST00000440184 427 ntBASIC8.3□□□□□ -1.08
IFT140Q96RY7 RPSAP51-201ENST00000497462 645 ntBASIC8.3□□□□□ -1.08
IFT140Q96RY7 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC8.3□□□□□ -1.08
IFT140Q96RY7 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC8.3□□□□□ -1.08
IFT140Q96RY7 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC8.3□□□□□ -1.08
IFT140Q96RY7 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
IFT140Q96RY7 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
IFT140Q96RY7 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
IFT140Q96RY7 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC8.29□□□□□ -1.08
IFT140Q96RY7 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
IFT140Q96RY7 AL122126.1-201ENST00000546905 1318 ntBASIC8.29□□□□□ -1.08
IFT140Q96RY7 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
IFT140Q96RY7 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
IFT140Q96RY7 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
IFT140Q96RY7 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
IFT140Q96RY7 AC025750.1-201ENST00000399891 379 ntBASIC8.29□□□□□ -1.08
IFT140Q96RY7 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC8.29□□□□□ -1.08
IFT140Q96RY7 SNORA84-201ENST00000459229 133 ntBASIC8.29□□□□□ -1.08
IFT140Q96RY7 AC091167.1-201ENST00000492017 396 ntBASIC8.29□□□□□ -1.08
IFT140Q96RY7 MED28P5-201ENST00000528254 438 ntBASIC8.29□□□□□ -1.08
IFT140Q96RY7 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC8.29□□□□□ -1.08
IFT140Q96RY7 AC115286.1-201ENST00000604298 434 ntBASIC8.29□□□□□ -1.08
IFT140Q96RY7 AL139124.1-201ENST00000609123 421 ntBASIC8.29□□□□□ -1.08
IFT140Q96RY7 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
IFT140Q96RY7 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
IFT140Q96RY7 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC8.29□□□□□ -1.08
IFT140Q96RY7 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC8.29□□□□□ -1.08
IFT140Q96RY7 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC8.29□□□□□ -1.08
IFT140Q96RY7 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
IFT140Q96RY7 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC8.29□□□□□ -1.08
IFT140Q96RY7 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC8.29□□□□□ -1.08
IFT140Q96RY7 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
IFT140Q96RY7 AC093671.1-201ENST00000624981 2929 ntBASIC8.28□□□□□ -1.08
IFT140Q96RY7 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
IFT140Q96RY7 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
IFT140Q96RY7 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
IFT140Q96RY7 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
IFT140Q96RY7 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
IFT140Q96RY7 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC8.28□□□□□ -1.08
IFT140Q96RY7 MTCO1P35-201ENST00000515270 228 ntBASIC8.28□□□□□ -1.08
IFT140Q96RY7 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC8.28□□□□□ -1.08
IFT140Q96RY7 OR8G5-201ENST00000524943 1041 ntBASIC8.28□□□□□ -1.08
IFT140Q96RY7 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC8.28□□□□□ -1.08
IFT140Q96RY7 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC8.28□□□□□ -1.08
IFT140Q96RY7 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC8.28□□□□□ -1.08
IFT140Q96RY7 AL034408.1-201ENST00000637712 664 ntBASIC8.28□□□□□ -1.08
IFT140Q96RY7 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
IFT140Q96RY7 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC8.28□□□□□ -1.08
IFT140Q96RY7 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
IFT140Q96RY7 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
IFT140Q96RY7 MSL3P1-202ENST00000440028 1468 ntBASIC8.28□□□□□ -1.08
IFT140Q96RY7 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
IFT140Q96RY7 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
IFT140Q96RY7 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
IFT140Q96RY7 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
IFT140Q96RY7 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
IFT140Q96RY7 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC8.27□□□□□ -1.08
IFT140Q96RY7 AL445189.1-201ENST00000405722 338 ntBASIC8.27□□□□□ -1.09
IFT140Q96RY7 LINC01881-201ENST00000416103 412 ntBASIC8.27□□□□□ -1.09
IFT140Q96RY7 ATG4AP1-201ENST00000416893 538 ntBASIC8.27□□□□□ -1.09
IFT140Q96RY7 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC8.27□□□□□ -1.09
IFT140Q96RY7 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
IFT140Q96RY7 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC8.27□□□□□ -1.09
IFT140Q96RY7 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
IFT140Q96RY7 AC034105.4-201ENST00000568304 277 ntBASIC8.27□□□□□ -1.09
IFT140Q96RY7 AC019322.1-201ENST00000571869 389 ntBASIC8.27□□□□□ -1.09
IFT140Q96RY7 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC8.27□□□□□ -1.09
IFT140Q96RY7 CARF-208ENST00000428585 2513 ntTSL 2 BASIC8.27□□□□□ -1.09
IFT140Q96RY7 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
IFT140Q96RY7 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
IFT140Q96RY7 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
IFT140Q96RY7 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC8.27□□□□□ -1.09
IFT140Q96RY7 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
IFT140Q96RY7 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
IFT140Q96RY7 AC125257.1-201ENST00000560400 2930 ntBASIC8.27□□□□□ -1.09
IFT140Q96RY7 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC8.27□□□□□ -1.09
IFT140Q96RY7 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
IFT140Q96RY7 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
IFT140Q96RY7 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
IFT140Q96RY7 OR4K17-201ENST00000315543 1032 ntBASIC8.26□□□□□ -1.09
IFT140Q96RY7 U3.28-201ENST00000391249 210 ntBASIC8.26□□□□□ -1.09
IFT140Q96RY7 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
IFT140Q96RY7 AC000111.2-201ENST00000448200 210 ntBASIC8.26□□□□□ -1.09
IFT140Q96RY7 IGKV3OR22-2-201ENST00000517943 313 ntBASIC8.26□□□□□ -1.09
IFT140Q96RY7 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
IFT140Q96RY7 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC8.26□□□□□ -1.09
IFT140Q96RY7 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
IFT140Q96RY7 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
IFT140Q96RY7 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
IFT140Q96RY7 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
IFT140Q96RY7 MAPK10-263ENST00000641052 4307 ntBASIC8.26□□□□□ -1.09
IFT140Q96RY7 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
IFT140Q96RY7 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
IFT140Q96RY7 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
IFT140Q96RY7 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
IFT140Q96RY7 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
IFT140Q96RY7 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
IFT140Q96RY7 AC017079.1-201ENST00000333650 415 ntBASIC8.26□□□□□ -1.09
IFT140Q96RY7 RNA5SP44-201ENST00000410446 133 ntBASIC8.26□□□□□ -1.09
IFT140Q96RY7 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms