Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL355974.3-201ENST00000617383 467 ntBASIC5.46□□□□□ -1.54
SNX18Q96RF0 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SNX18Q96RF0 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SNX18Q96RF0 IFIT1P1-201ENST00000400497 1449 ntBASIC5.46□□□□□ -1.54
SNX18Q96RF0 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SNX18Q96RF0 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SNX18Q96RF0 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SNX18Q96RF0 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SNX18Q96RF0 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SNX18Q96RF0 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SNX18Q96RF0 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SNX18Q96RF0 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SNX18Q96RF0 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.45□□□□□ -1.54
SNX18Q96RF0 MTND4P8-201ENST00000514997 1362 ntBASIC5.45□□□□□ -1.54
SNX18Q96RF0 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SNX18Q96RF0 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SNX18Q96RF0 RNU105B-201ENST00000364478 208 ntBASIC5.45□□□□□ -1.54
SNX18Q96RF0 RNA5SP433-201ENST00000364491 114 ntBASIC5.45□□□□□ -1.54
SNX18Q96RF0 RNU4-28P-201ENST00000364739 141 ntBASIC5.45□□□□□ -1.54
SNX18Q96RF0 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SNX18Q96RF0 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 ATP5F1P2-201ENST00000398143 760 ntBASIC5.45□□□□□ -1.54
SNX18Q96RF0 RN7SKP144-201ENST00000411108 279 ntBASIC5.45□□□□□ -1.54
SNX18Q96RF0 MYL6P5-201ENST00000412707 459 ntBASIC5.45□□□□□ -1.54
SNX18Q96RF0 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SNX18Q96RF0 RPS6P15-201ENST00000431996 751 ntBASIC5.45□□□□□ -1.54
SNX18Q96RF0 AC138761.5-201ENST00000433967 325 ntBASIC5.45□□□□□ -1.54
SNX18Q96RF0 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 MED28P3-201ENST00000444288 531 ntBASIC5.45□□□□□ -1.54
SNX18Q96RF0 AC010240.2-201ENST00000445363 1205 ntBASIC5.45□□□□□ -1.54
SNX18Q96RF0 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 OR6K5P-201ENST00000447050 945 ntBASIC5.45□□□□□ -1.54
SNX18Q96RF0 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 AL133351.3-201ENST00000454998 193 ntBASIC5.45□□□□□ -1.54
SNX18Q96RF0 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 AC093752.1-206ENST00000511823 336 ntBASIC5.45□□□□□ -1.54
SNX18Q96RF0 HSD3BP3-201ENST00000514706 994 ntBASIC5.45□□□□□ -1.54
SNX18Q96RF0 RN7SKP141-201ENST00000516167 338 ntBASIC5.45□□□□□ -1.54
SNX18Q96RF0 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SNX18Q96RF0 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 AC006512.2-201ENST00000543250 486 ntBASIC5.45□□□□□ -1.54
SNX18Q96RF0 AC135279.1-201ENST00000543493 504 ntBASIC5.45□□□□□ -1.54
SNX18Q96RF0 AP003717.3-201ENST00000544832 1180 ntBASIC5.45□□□□□ -1.54
SNX18Q96RF0 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 AC079315.1-201ENST00000602952 623 ntBASIC5.45□□□□□ -1.54
SNX18Q96RF0 AL359513.1-201ENST00000614364 557 ntBASIC5.45□□□□□ -1.54
SNX18Q96RF0 AC025262.3-201ENST00000623666 360 ntBASIC5.45□□□□□ -1.54
SNX18Q96RF0 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SNX18Q96RF0 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
SNX18Q96RF0 THAP12P9-201ENST00000503971 2360 ntBASIC5.45□□□□□ -1.54
SNX18Q96RF0 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SNX18Q96RF0 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SNX18Q96RF0 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SNX18Q96RF0 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SNX18Q96RF0 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SNX18Q96RF0 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SNX18Q96RF0 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SNX18Q96RF0 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 AL133243.2-201ENST00000610331 1621 ntBASIC5.45□□□□□ -1.54
SNX18Q96RF0 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SNX18Q96RF0 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
SNX18Q96RF0 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SNX18Q96RF0 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms