Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 DDX52-213ENST00000617633 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 MIR372-201ENST00000362225 67 ntBASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 NOP56P2-201ENST00000447491 769 ntBASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 AC108751.3-201ENST00000461814 1020 ntBASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 ABCC13-202ENST00000463099 3842 ntBASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 AC008481.1-201ENST00000463278 396 ntBASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 RPL21P126-201ENST00000470049 478 ntBASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 ATP5LP5-201ENST00000483050 299 ntBASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 AC008958.1-201ENST00000511047 682 ntBASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 AC007016.1-201ENST00000512110 244 ntBASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 AC244100.1-202ENST00000621554 382 ntBASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 AC008124.1-201ENST00000609803 9730 ntBASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 OR13Z1P-201ENST00000416141 834 ntBASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 HSFY1P1-201ENST00000423928 1178 ntBASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 IGLVIV-65-201ENST00000517313 360 ntBASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 AC012400.1-201ENST00000518452 381 ntBASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 AC023043.4-201ENST00000612081 449 ntBASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 AC021422.1-201ENST00000621212 473 ntBASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 AL117378.2-201ENST00000622916 1337 ntBASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 AC018765.1-201ENST00000623357 3446 ntBASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 MEMO1P4-201ENST00000453590 386 ntBASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 AC104971.1-201ENST00000495117 578 ntBASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 MRPL49P2-201ENST00000521066 465 ntBASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 KC877982.1-201ENST00000602313 470 ntBASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 AL683813.2-201ENST00000605245 502 ntBASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
CSMD1Q96PZ7 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CSMD1Q96PZ7 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CSMD1Q96PZ7 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC4.15□□□□□ -1.75
CSMD1Q96PZ7 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CSMD1Q96PZ7 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC4.15□□□□□ -1.75
CSMD1Q96PZ7 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC4.15□□□□□ -1.75
CSMD1Q96PZ7 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CSMD1Q96PZ7 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CSMD1Q96PZ7 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CSMD1Q96PZ7 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
CSMD1Q96PZ7 HSFY6P-201ENST00000445573 403 ntBASIC4.15□□□□□ -1.75
CSMD1Q96PZ7 RNU1-88P-201ENST00000459274 128 ntBASIC4.15□□□□□ -1.75
CSMD1Q96PZ7 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.15□□□□□ -1.75
CSMD1Q96PZ7 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.15□□□□□ -1.75
CSMD1Q96PZ7 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC4.15□□□□□ -1.75
CSMD1Q96PZ7 AC244107.2-201ENST00000611773 76 ntBASIC4.15□□□□□ -1.75
CSMD1Q96PZ7 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CSMD1Q96PZ7 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CSMD1Q96PZ7 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CSMD1Q96PZ7 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CSMD1Q96PZ7 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.15□□□□□ -1.75
CSMD1Q96PZ7 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CSMD1Q96PZ7 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CSMD1Q96PZ7 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC4.15□□□□□ -1.75
CSMD1Q96PZ7 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.15□□□□□ -1.75
CSMD1Q96PZ7 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CSMD1Q96PZ7 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CSMD1Q96PZ7 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CSMD1Q96PZ7 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 AL451142.1-201ENST00000375867 775 ntBASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 RPL7AP25-201ENST00000423357 805 ntBASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 AC092754.1-201ENST00000472975 479 ntBASIC4.14□□□□□ -1.75
CSMD1Q96PZ7 AC015722.2-201ENST00000622210 551 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms