Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC011939.3-201ENST00000613686 466 ntBASIC6.82□□□□□ -1.32
CHAMP1Q96JM3 AL096712.1-201ENST00000614561 159 ntBASIC6.82□□□□□ -1.32
CHAMP1Q96JM3 MIR6826-201ENST00000617808 98 ntBASIC6.82□□□□□ -1.32
CHAMP1Q96JM3 AL512652.1-201ENST00000619006 500 ntBASIC6.82□□□□□ -1.32
CHAMP1Q96JM3 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC6.82□□□□□ -1.32
CHAMP1Q96JM3 MIR6730-201ENST00000622213 67 ntBASIC6.82□□□□□ -1.32
CHAMP1Q96JM3 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CHAMP1Q96JM3 AL161901.1-201ENST00000624954 3425 ntBASIC6.82□□□□□ -1.32
CHAMP1Q96JM3 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CHAMP1Q96JM3 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CHAMP1Q96JM3 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
CHAMP1Q96JM3 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CHAMP1Q96JM3 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
CHAMP1Q96JM3 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CHAMP1Q96JM3 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CHAMP1Q96JM3 ADAM24P-201ENST00000398655 2101 ntBASIC6.82□□□□□ -1.32
CHAMP1Q96JM3 RBMY1HP-201ENST00000382759 1389 ntBASIC6.82□□□□□ -1.32
CHAMP1Q96JM3 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CHAMP1Q96JM3 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CHAMP1Q96JM3 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC6.82□□□□□ -1.32
CHAMP1Q96JM3 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 MIR323A-201ENST00000362199 86 ntBASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 RNU5B-1-201ENST00000363286 116 ntBASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 SNORD56.4-201ENST00000363883 71 ntBASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 NPM1P37-201ENST00000403105 874 ntBASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 RN7SKP144-201ENST00000411108 279 ntBASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 AL035422.1-201ENST00000414193 397 ntBASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 AC008173.1-201ENST00000418901 264 ntBASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 MTCO3P5-201ENST00000433620 714 ntBASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 OR3D1P-201ENST00000438288 955 ntBASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 GSTA7P-201ENST00000438425 448 ntBASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 AL663074.2-201ENST00000440621 479 ntBASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 ART2BP-201ENST00000453501 499 ntBASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 AC104164.1-201ENST00000460282 590 ntBASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 H3F3AP5-201ENST00000475267 429 ntBASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 AC090958.1-201ENST00000511122 351 ntBASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 Y_RNA.655-201ENST00000515919 96 ntBASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 RNU6-1028P-201ENST00000517164 93 ntBASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 OR4A2P-201ENST00000527276 913 ntBASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 MRPS21P8-201ENST00000569196 235 ntBASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 TXNP4-201ENST00000575018 310 ntBASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 AC067773.1-201ENST00000603284 1094 ntBASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 AL592494.3-201ENST00000609485 464 ntBASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 AL133370.2-201ENST00000619934 439 ntBASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 AC130360.2-201ENST00000533477 1556 ntBASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 THAP12P9-201ENST00000503971 2360 ntBASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CHAMP1Q96JM3 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CHAMP1Q96JM3 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHAMP1Q96JM3 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHAMP1Q96JM3 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
CHAMP1Q96JM3 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.8□□□□□ -1.32
CHAMP1Q96JM3 SNORA21-201ENST00000362423 132 ntBASIC6.8□□□□□ -1.32
CHAMP1Q96JM3 RNU4-68P-201ENST00000364314 141 ntBASIC6.8□□□□□ -1.32
CHAMP1Q96JM3 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CHAMP1Q96JM3 AC087752.1-201ENST00000391360 558 ntBASIC6.8□□□□□ -1.32
CHAMP1Q96JM3 AL391422.1-201ENST00000402155 436 ntBASIC6.8□□□□□ -1.32
CHAMP1Q96JM3 AL021331.1-201ENST00000402817 582 ntBASIC6.8□□□□□ -1.32
CHAMP1Q96JM3 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.8□□□□□ -1.32
CHAMP1Q96JM3 PRELID1P1-201ENST00000403549 660 ntBASIC6.8□□□□□ -1.32
CHAMP1Q96JM3 MIR1302-8-201ENST00000408342 128 ntBASIC6.8□□□□□ -1.32
CHAMP1Q96JM3 RNA5SP156-201ENST00000410250 110 ntBASIC6.8□□□□□ -1.32
CHAMP1Q96JM3 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.8□□□□□ -1.32
CHAMP1Q96JM3 RPL35AP31-201ENST00000418340 337 ntBASIC6.8□□□□□ -1.32
CHAMP1Q96JM3 QRSL1P2-201ENST00000418582 964 ntBASIC6.8□□□□□ -1.32
CHAMP1Q96JM3 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CHAMP1Q96JM3 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC6.8□□□□□ -1.32
CHAMP1Q96JM3 AL513175.2-201ENST00000422071 443 ntBASIC6.8□□□□□ -1.32
CHAMP1Q96JM3 CHEK2P5-201ENST00000423877 246 ntBASIC6.8□□□□□ -1.32
CHAMP1Q96JM3 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CHAMP1Q96JM3 GTF2IP3-201ENST00000433887 494 ntBASIC6.8□□□□□ -1.32
CHAMP1Q96JM3 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CHAMP1Q96JM3 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms