Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.06□□□□□ -1.6
PTP4A1Q93096 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PTP4A1Q93096 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.06□□□□□ -1.6
PTP4A1Q93096 AP001496.3-201ENST00000580230 913 ntBASIC5.06□□□□□ -1.6
PTP4A1Q93096 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.06□□□□□ -1.6
PTP4A1Q93096 MIR4260-201ENST00000583107 67 ntBASIC5.06□□□□□ -1.6
PTP4A1Q93096 AC012557.1-201ENST00000607115 611 ntBASIC5.06□□□□□ -1.6
PTP4A1Q93096 AC139769.3-201ENST00000618383 175 ntBASIC5.06□□□□□ -1.6
PTP4A1Q93096 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.06□□□□□ -1.6
PTP4A1Q93096 AC022919.1-201ENST00000624979 626 ntBASIC5.06□□□□□ -1.6
PTP4A1Q93096 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTP4A1Q93096 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTP4A1Q93096 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
PTP4A1Q93096 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
PTP4A1Q93096 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PTP4A1Q93096 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.06□□□□□ -1.6
PTP4A1Q93096 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTP4A1Q93096 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTP4A1Q93096 PDZK1P1-202ENST00000425209 1350 ntBASIC5.05□□□□□ -1.6
PTP4A1Q93096 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.05□□□□□ -1.6
PTP4A1Q93096 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.05□□□□□ -1.6
PTP4A1Q93096 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PTP4A1Q93096 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTP4A1Q93096 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTP4A1Q93096 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTP4A1Q93096 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.05□□□□□ -1.6
PTP4A1Q93096 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTP4A1Q93096 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PTP4A1Q93096 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTP4A1Q93096 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTP4A1Q93096 SUGT1P2-201ENST00000379452 992 ntBASIC5.05□□□□□ -1.6
PTP4A1Q93096 GSTM3P2-201ENST00000412746 530 ntBASIC5.05□□□□□ -1.6
PTP4A1Q93096 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.05□□□□□ -1.6
PTP4A1Q93096 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.05□□□□□ -1.6
PTP4A1Q93096 BX284632.2-201ENST00000421091 399 ntBASIC5.05□□□□□ -1.6
PTP4A1Q93096 AC115283.1-201ENST00000427353 400 ntBASIC5.05□□□□□ -1.6
PTP4A1Q93096 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.05□□□□□ -1.6
PTP4A1Q93096 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.05□□□□□ -1.6
PTP4A1Q93096 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.05□□□□□ -1.6
PTP4A1Q93096 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.05□□□□□ -1.6
PTP4A1Q93096 RPS20P1-201ENST00000434853 354 ntBASIC5.05□□□□□ -1.6
PTP4A1Q93096 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.05□□□□□ -1.6
PTP4A1Q93096 AL512605.1-202ENST00000441919 381 ntBASIC5.05□□□□□ -1.6
PTP4A1Q93096 AL359955.2-201ENST00000445380 353 ntBASIC5.05□□□□□ -1.6
PTP4A1Q93096 PTMAP3-201ENST00000447474 330 ntBASIC5.05□□□□□ -1.6
PTP4A1Q93096 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.05□□□□□ -1.6
PTP4A1Q93096 AZGP1P2-201ENST00000454506 345 ntBASIC5.05□□□□□ -1.6
PTP4A1Q93096 NXT1P1-201ENST00000458481 316 ntBASIC5.05□□□□□ -1.6
PTP4A1Q93096 ACA64.1-201ENST00000459171 127 ntBASIC5.05□□□□□ -1.6
PTP4A1Q93096 RPL23AP12-201ENST00000467573 473 ntBASIC5.05□□□□□ -1.6
PTP4A1Q93096 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTP4A1Q93096 RPS17P15-201ENST00000475609 349 ntBASIC5.05□□□□□ -1.6
PTP4A1Q93096 ATP5LP5-201ENST00000483050 299 ntBASIC5.05□□□□□ -1.6
PTP4A1Q93096 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.05□□□□□ -1.6
PTP4A1Q93096 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.05□□□□□ -1.6
PTP4A1Q93096 AP000648.1-201ENST00000529682 397 ntBASIC5.05□□□□□ -1.6
PTP4A1Q93096 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.05□□□□□ -1.6
PTP4A1Q93096 NPM1P47-201ENST00000560843 856 ntBASIC5.05□□□□□ -1.6
PTP4A1Q93096 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.05□□□□□ -1.6
PTP4A1Q93096 AC134669.1-201ENST00000581275 672 ntBASIC5.05□□□□□ -1.6
PTP4A1Q93096 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.05□□□□□ -1.6
PTP4A1Q93096 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.05□□□□□ -1.6
PTP4A1Q93096 AL031601.1-201ENST00000605702 394 ntBASIC5.05□□□□□ -1.6
PTP4A1Q93096 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.05□□□□□ -1.6
PTP4A1Q93096 AC110792.4-201ENST00000609843 298 ntBASIC5.05□□□□□ -1.6
PTP4A1Q93096 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.05□□□□□ -1.6
PTP4A1Q93096 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.05□□□□□ -1.6
PTP4A1Q93096 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTP4A1Q93096 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PTP4A1Q93096 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTP4A1Q93096 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTP4A1Q93096 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTP4A1Q93096 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTP4A1Q93096 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTP4A1Q93096 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.05□□□□□ -1.6
PTP4A1Q93096 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTP4A1Q93096 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.05□□□□□ -1.6
PTP4A1Q93096 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PTP4A1Q93096 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTP4A1Q93096 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PTP4A1Q93096 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.04□□□□□ -1.6
PTP4A1Q93096 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTP4A1Q93096 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTP4A1Q93096 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
PTP4A1Q93096 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTP4A1Q93096 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTP4A1Q93096 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PTP4A1Q93096 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.04□□□□□ -1.6
PTP4A1Q93096 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.04□□□□□ -1.6
PTP4A1Q93096 OR5T3-201ENST00000303059 1023 ntBASIC5.04□□□□□ -1.6
PTP4A1Q93096 GAPDHP24-201ENST00000328713 983 ntBASIC5.04□□□□□ -1.6
PTP4A1Q93096 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PTP4A1Q93096 RNA5SP500-201ENST00000364486 119 ntBASIC5.04□□□□□ -1.6
PTP4A1Q93096 RN7SKP275-201ENST00000364626 301 ntBASIC5.04□□□□□ -1.6
PTP4A1Q93096 RNU6-244P-201ENST00000391028 104 ntBASIC5.04□□□□□ -1.6
PTP4A1Q93096 ATP5HP3-201ENST00000396994 486 ntBASIC5.04□□□□□ -1.6
PTP4A1Q93096 MTND3P20-201ENST00000407663 186 ntBASIC5.04□□□□□ -1.6
PTP4A1Q93096 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.04□□□□□ -1.6
PTP4A1Q93096 AL035660.1-201ENST00000422041 222 ntBASIC5.04□□□□□ -1.6
PTP4A1Q93096 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms