Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 TAB3P1-202ENST00000452645 1634 ntBASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 PAH-201ENST00000307000 2466 ntTSL 5 BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 MTND5P27-201ENST00000428871 1720 ntBASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 TCF4-246ENST00000570287 3163 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 RIOK3P1-201ENST00000418778 1528 ntBASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 RN7SKP174-201ENST00000363803 330 ntBASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 Y_RNA.259-201ENST00000364619 101 ntBASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 RNA5SP176-201ENST00000390956 110 ntBASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 AC121334.1-201ENST00000396414 802 ntBASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 RNA5SP80-201ENST00000410475 111 ntBASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 OR2B7P-201ENST00000429302 934 ntBASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 RPL7P56-201ENST00000429441 717 ntBASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 AC104698.1-201ENST00000435671 276 ntBASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 Y_RNA.639-201ENST00000458981 102 ntBASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 SNORD19B-201ENST00000459623 84 ntBASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 AC073594.1-201ENST00000462065 364 ntBASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 AC087312.1-201ENST00000471411 480 ntBASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 AP000797.1-201ENST00000478870 387 ntBASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 CCDC11P1-201ENST00000503137 1162 ntBASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 AC114324.2-202ENST00000503812 134 ntBASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 AC008967.1-201ENST00000504843 163 ntBASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 RN7SKP11-201ENST00000517018 287 ntBASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 OR5M7P-201ENST00000526140 972 ntBASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 OR4A1P-201ENST00000532342 920 ntBASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 MIR3912-201ENST00000577566 105 ntBASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 AC004853.1-201ENST00000604902 698 ntBASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 AC010200.2-201ENST00000605098 235 ntBASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 AC069209.1-201ENST00000619282 651 ntBASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 MAPK10-377ENST00000642006 2752 ntBASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 LRRC2-AS1-201ENST00000599511 2291 ntBASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 OR2A20P-201ENST00000479887 2913 ntBASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS3Q8IXF0 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 MIR548M-201ENST00000408260 86 ntBASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 RNU2-17P-201ENST00000410290 190 ntBASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 PIGPP2-201ENST00000411569 458 ntBASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 OFD1P1Y-201ENST00000411756 1225 ntBASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms