Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 OR2A3P-201ENST00000493774 953 ntBASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 KCTD9P6-201ENST00000522306 950 ntBASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 OR10D4P-201ENST00000525892 951 ntBASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 AGGF1P9-201ENST00000561884 913 ntBASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 AC079315.1-201ENST00000602952 623 ntBASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 AC087468.1-201ENST00000604365 630 ntBASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 MIPEPP2-201ENST00000422560 1819 ntBASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 TTC39DP-201ENST00000416781 1688 ntBASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 CASC19-221ENST00000641309 1382 ntBASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 AC107977.1-201ENST00000355745 939 ntBASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 RNA5SP90-201ENST00000364801 99 ntBASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 AC005522.1-201ENST00000395416 346 ntBASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 AL596448.1-201ENST00000415024 392 ntBASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 RPL36AP10-201ENST00000421785 322 ntBASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 AC004980.3-201ENST00000447046 365 ntBASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 GYG1P1-201ENST00000460864 698 ntBASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 AL591473.1-201ENST00000464297 313 ntBASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 AC097173.1-201ENST00000505862 819 ntBASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 RNA5SP249-201ENST00000516127 99 ntBASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 TOMM20P1-201ENST00000534518 427 ntBASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 BLZF2P-201ENST00000553776 1130 ntBASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 NDUFB4P11-201ENST00000560510 395 ntBASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 AC000068.2-201ENST00000608816 460 ntBASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 AC015871.5-202ENST00000623252 701 ntBASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 AP001962.1-201ENST00000624114 559 ntBASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NUDCD3Q8IVD9 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NUDCD3Q8IVD9 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.6
NUDCD3Q8IVD9 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.09□□□□□ -1.6
NUDCD3Q8IVD9 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
NUDCD3Q8IVD9 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NUDCD3Q8IVD9 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NUDCD3Q8IVD9 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.09□□□□□ -1.6
NUDCD3Q8IVD9 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
NUDCD3Q8IVD9 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 SCARNA15-201ENST00000607520 4325 ntBASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 RN7SKP275-201ENST00000364626 301 ntBASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 OR7E156P-201ENST00000400303 464 ntBASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 MIR1271-201ENST00000408537 86 ntBASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 BMS1P17-202ENST00000416720 316 ntBASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 RPL24P2-201ENST00000421023 475 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms