Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.07□□□□□ -1.6
SHFQ7M4L6 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.07□□□□□ -1.6
SHFQ7M4L6 AC008507.2-201ENST00000588402 1176 ntBASIC5.07□□□□□ -1.6
SHFQ7M4L6 AC011492.1-201ENST00000600023 315 ntBASIC5.07□□□□□ -1.6
SHFQ7M4L6 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.07□□□□□ -1.6
SHFQ7M4L6 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.07□□□□□ -1.6
SHFQ7M4L6 MIR6809-201ENST00000612189 116 ntBASIC5.07□□□□□ -1.6
SHFQ7M4L6 AL162574.1-201ENST00000615702 950 ntBASIC5.07□□□□□ -1.6
SHFQ7M4L6 AC078880.5-201ENST00000617845 421 ntBASIC5.07□□□□□ -1.6
SHFQ7M4L6 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHFQ7M4L6 RPL23AP61-201ENST00000623642 466 ntBASIC5.07□□□□□ -1.6
SHFQ7M4L6 AC025262.3-201ENST00000623666 360 ntBASIC5.07□□□□□ -1.6
SHFQ7M4L6 AC093875.1-201ENST00000623688 504 ntBASIC5.07□□□□□ -1.6
SHFQ7M4L6 AC126544.2-201ENST00000625174 749 ntBASIC5.07□□□□□ -1.6
SHFQ7M4L6 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.07□□□□□ -1.6
SHFQ7M4L6 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.07□□□□□ -1.6
SHFQ7M4L6 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHFQ7M4L6 OR4F13P-202ENST00000560066 2054 ntBASIC5.07□□□□□ -1.6
SHFQ7M4L6 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHFQ7M4L6 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SHFQ7M4L6 HSPD1P14-201ENST00000432666 1618 ntBASIC5.07□□□□□ -1.6
SHFQ7M4L6 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
SHFQ7M4L6 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.07□□□□□ -1.6
SHFQ7M4L6 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.07□□□□□ -1.6
SHFQ7M4L6 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SHFQ7M4L6 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.07□□□□□ -1.6
SHFQ7M4L6 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SHFQ7M4L6 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHFQ7M4L6 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHFQ7M4L6 AC006206.1-201ENST00000544842 3387 ntBASIC5.07□□□□□ -1.6
SHFQ7M4L6 AL034549.2-201ENST00000618285 3373 ntBASIC5.07□□□□□ -1.6
SHFQ7M4L6 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
SHFQ7M4L6 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHFQ7M4L6 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHFQ7M4L6 PDZK1P1-202ENST00000425209 1350 ntBASIC5.06□□□□□ -1.6
SHFQ7M4L6 AL354854.1-201ENST00000455940 1363 ntBASIC5.06□□□□□ -1.6
SHFQ7M4L6 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SHFQ7M4L6 MTND5P23-201ENST00000430812 1655 ntBASIC5.06□□□□□ -1.6
SHFQ7M4L6 AC008432.1-201ENST00000615912 1320 ntBASIC5.06□□□□□ -1.6
SHFQ7M4L6 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
SHFQ7M4L6 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.06□□□□□ -1.6
SHFQ7M4L6 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.06□□□□□ -1.6
SHFQ7M4L6 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SHFQ7M4L6 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHFQ7M4L6 RNU6-481P-201ENST00000384194 107 ntBASIC5.06□□□□□ -1.6
SHFQ7M4L6 MIR130B-202ENST00000385018 82 ntBASIC5.06□□□□□ -1.6
SHFQ7M4L6 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHFQ7M4L6 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
SHFQ7M4L6 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.06□□□□□ -1.6
SHFQ7M4L6 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.06□□□□□ -1.6
SHFQ7M4L6 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHFQ7M4L6 AC106883.1-201ENST00000418805 562 ntBASIC5.06□□□□□ -1.6
SHFQ7M4L6 RPS26P13-201ENST00000419030 330 ntBASIC5.06□□□□□ -1.6
SHFQ7M4L6 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.06□□□□□ -1.6
SHFQ7M4L6 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SHFQ7M4L6 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.06□□□□□ -1.6
SHFQ7M4L6 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.06□□□□□ -1.6
SHFQ7M4L6 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.06□□□□□ -1.6
SHFQ7M4L6 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.06□□□□□ -1.6
SHFQ7M4L6 AL157827.1-201ENST00000447622 132 ntBASIC5.06□□□□□ -1.6
SHFQ7M4L6 AC023194.2-201ENST00000465398 406 ntBASIC5.06□□□□□ -1.6
SHFQ7M4L6 AC005165.2-201ENST00000466070 380 ntBASIC5.06□□□□□ -1.6
SHFQ7M4L6 AC044810.1-201ENST00000480271 711 ntBASIC5.06□□□□□ -1.6
SHFQ7M4L6 AC069306.1-201ENST00000507006 843 ntBASIC5.06□□□□□ -1.6
SHFQ7M4L6 AC133963.2-201ENST00000513686 578 ntBASIC5.06□□□□□ -1.6
SHFQ7M4L6 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.06□□□□□ -1.6
SHFQ7M4L6 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHFQ7M4L6 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.06□□□□□ -1.6
SHFQ7M4L6 AC122688.1-201ENST00000541494 223 ntBASIC5.06□□□□□ -1.6
SHFQ7M4L6 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.06□□□□□ -1.6
SHFQ7M4L6 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.06□□□□□ -1.6
SHFQ7M4L6 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.06□□□□□ -1.6
SHFQ7M4L6 AGGF1P7-201ENST00000562369 913 ntBASIC5.06□□□□□ -1.6
SHFQ7M4L6 AC096996.1-201ENST00000563813 325 ntBASIC5.06□□□□□ -1.6
SHFQ7M4L6 AC023825.1-201ENST00000566704 1030 ntBASIC5.06□□□□□ -1.6
SHFQ7M4L6 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.06□□□□□ -1.6
SHFQ7M4L6 AC090607.5-201ENST00000615692 224 ntBASIC5.06□□□□□ -1.6
SHFQ7M4L6 AC084824.4-201ENST00000620106 731 ntBASIC5.06□□□□□ -1.6
SHFQ7M4L6 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHFQ7M4L6 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.06□□□□□ -1.6
SHFQ7M4L6 AC103703.1-201ENST00000634783 663 ntBASIC5.06□□□□□ -1.6
SHFQ7M4L6 AC013437.2-201ENST00000639587 677 ntBASIC5.06□□□□□ -1.6
SHFQ7M4L6 CASC19-274ENST00000642018 970 ntBASIC5.06□□□□□ -1.6
SHFQ7M4L6 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.06□□□□□ -1.6
SHFQ7M4L6 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHFQ7M4L6 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHFQ7M4L6 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.06□□□□□ -1.6
SHFQ7M4L6 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.06□□□□□ -1.6
SHFQ7M4L6 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
SHFQ7M4L6 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
SHFQ7M4L6 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHFQ7M4L6 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.06□□□□□ -1.6
SHFQ7M4L6 AC007382.1-201ENST00000624376 2618 ntBASIC5.06□□□□□ -1.6
SHFQ7M4L6 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.06□□□□□ -1.6
SHFQ7M4L6 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHFQ7M4L6 AC245100.2-201ENST00000454544 1679 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 AC112198.2-201ENST00000426589 6996 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 AC020633.1-201ENST00000468439 2247 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 AC079097.1-201ENST00000512187 1399 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms