Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC5.43□□□□□ -1.54
PTCHD4Q6ZW05 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.43□□□□□ -1.54
PTCHD4Q6ZW05 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.43□□□□□ -1.54
PTCHD4Q6ZW05 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.43□□□□□ -1.54
PTCHD4Q6ZW05 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTCHD4Q6ZW05 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.43□□□□□ -1.54
PTCHD4Q6ZW05 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTCHD4Q6ZW05 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTCHD4Q6ZW05 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PTCHD4Q6ZW05 AC027228.2-201ENST00000567141 2154 ntBASIC5.43□□□□□ -1.54
PTCHD4Q6ZW05 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTCHD4Q6ZW05 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.43□□□□□ -1.54
PTCHD4Q6ZW05 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTCHD4Q6ZW05 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTCHD4Q6ZW05 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AC016745.2-201ENST00000608834 3443 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 EI24P3-201ENST00000399046 1062 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 PEX12P1-201ENST00000400284 1048 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 RPL7P27-201ENST00000403775 720 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 RNU4-22P-201ENST00000411058 166 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AC010385.1-201ENST00000412374 256 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AC023128.2-201ENST00000420880 1223 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AL365338.1-201ENST00000422282 858 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 CRIP1P1-201ENST00000427567 185 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 GTF2IP3-201ENST00000433887 494 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 OR3D1P-201ENST00000438288 955 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AC004022.1-201ENST00000447766 1066 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 RPS18P1-201ENST00000447840 458 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AC002553.2-201ENST00000453217 340 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 SDC4P-201ENST00000453285 601 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 PTGES3P5-201ENST00000455109 434 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 VN1R40P-201ENST00000455196 941 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AL122001.1-201ENST00000457027 370 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 RN7SL72P-201ENST00000460697 269 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 RPS20P4-201ENST00000461659 355 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AP000563.1-201ENST00000490865 758 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AC082651.2-201ENST00000496833 166 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AC138517.1-201ENST00000515724 568 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 SNORA74.1-201ENST00000516320 180 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AC007346.1-201ENST00000569208 867 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AL513327.3-201ENST00000602618 469 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AP001823.1-201ENST00000604056 1003 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AC022001.1-201ENST00000605193 268 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AC012557.1-201ENST00000607115 611 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 U6.48-201ENST00000618523 106 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AC112694.2-201ENST00000623697 768 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AP002967.1-201ENST00000624203 539 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AC005618.4-201ENST00000625053 554 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 FRG1EP-201ENST00000634469 770 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 AC022325.1-201ENST00000502748 2199 ntBASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.42□□□□□ -1.54
PTCHD4Q6ZW05 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.41□□□□□ -1.54
PTCHD4Q6ZW05 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.41□□□□□ -1.54
PTCHD4Q6ZW05 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
PTCHD4Q6ZW05 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTCHD4Q6ZW05 LINC01613-201ENST00000561476 2780 ntBASIC5.41□□□□□ -1.54
PTCHD4Q6ZW05 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms