Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC8.41□□□□□ -1.06
RC3H1Q5TC82 MED21-206ENST00000546323 575 ntTSL 3 BASIC8.41□□□□□ -1.06
RC3H1Q5TC82 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC8.41□□□□□ -1.06
RC3H1Q5TC82 AL162632.2-201ENST00000553933 399 ntBASIC8.41□□□□□ -1.06
RC3H1Q5TC82 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC8.41□□□□□ -1.06
RC3H1Q5TC82 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC8.41□□□□□ -1.06
RC3H1Q5TC82 AC087575.1-201ENST00000585087 229 ntBASIC8.41□□□□□ -1.06
RC3H1Q5TC82 IGKV2OR2-10-201ENST00000613976 311 ntBASIC8.41□□□□□ -1.06
RC3H1Q5TC82 AL096712.1-201ENST00000614561 159 ntBASIC8.41□□□□□ -1.06
RC3H1Q5TC82 MIR4302-201ENST00000638058 60 ntBASIC8.41□□□□□ -1.06
RC3H1Q5TC82 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
RC3H1Q5TC82 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
RC3H1Q5TC82 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
RC3H1Q5TC82 AC083806.2-201ENST00000617795 2685 ntBASIC8.41□□□□□ -1.06
RC3H1Q5TC82 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RC3H1Q5TC82 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC8.41□□□□□ -1.06
RC3H1Q5TC82 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
RC3H1Q5TC82 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC8.41□□□□□ -1.06
RC3H1Q5TC82 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
RC3H1Q5TC82 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
RC3H1Q5TC82 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC8.4□□□□□ -1.06
RC3H1Q5TC82 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC8.4□□□□□ -1.06
RC3H1Q5TC82 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
RC3H1Q5TC82 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
RC3H1Q5TC82 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
RC3H1Q5TC82 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
RC3H1Q5TC82 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
RC3H1Q5TC82 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
RC3H1Q5TC82 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC8.4□□□□□ -1.06
RC3H1Q5TC82 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
RC3H1Q5TC82 RNY4P14-201ENST00000363656 96 ntBASIC8.4□□□□□ -1.06
RC3H1Q5TC82 Y_RNA.529-201ENST00000384586 119 ntBASIC8.4□□□□□ -1.06
RC3H1Q5TC82 RNU6-907P-201ENST00000390924 102 ntBASIC8.4□□□□□ -1.06
RC3H1Q5TC82 TANK-203ENST00000402568 878 ntTSL 5 BASIC8.4□□□□□ -1.06
RC3H1Q5TC82 TPT1P2-201ENST00000413105 503 ntBASIC8.4□□□□□ -1.06
RC3H1Q5TC82 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC8.4□□□□□ -1.06
RC3H1Q5TC82 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
RC3H1Q5TC82 RPL21P43-201ENST00000425440 472 ntBASIC8.4□□□□□ -1.06
RC3H1Q5TC82 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC8.4□□□□□ -1.06
RC3H1Q5TC82 AC007563.3-201ENST00000433233 371 ntBASIC8.4□□□□□ -1.06
RC3H1Q5TC82 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC8.4□□□□□ -1.06
RC3H1Q5TC82 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC8.4□□□□□ -1.06
RC3H1Q5TC82 CRYGGP-201ENST00000443337 145 ntBASIC8.4□□□□□ -1.06
RC3H1Q5TC82 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC8.4□□□□□ -1.06
RC3H1Q5TC82 ARL5AP2-201ENST00000444698 533 ntBASIC8.4□□□□□ -1.06
RC3H1Q5TC82 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RC3H1Q5TC82 PSPHP1-201ENST00000450062 261 ntBASIC8.4□□□□□ -1.06
RC3H1Q5TC82 AC091959.2-201ENST00000477363 321 ntBASIC8.4□□□□□ -1.06
RC3H1Q5TC82 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC8.4□□□□□ -1.06
RC3H1Q5TC82 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
RC3H1Q5TC82 AC008429.2-201ENST00000523057 864 ntBASIC8.4□□□□□ -1.06
RC3H1Q5TC82 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
RC3H1Q5TC82 AC093012.1-202ENST00000549403 582 ntBASIC8.4□□□□□ -1.06
RC3H1Q5TC82 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC8.4□□□□□ -1.06
RC3H1Q5TC82 AC063977.5-201ENST00000601044 974 ntBASIC8.4□□□□□ -1.06
RC3H1Q5TC82 AC011373.1-201ENST00000607270 237 ntBASIC8.4□□□□□ -1.06
RC3H1Q5TC82 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC8.4□□□□□ -1.06
RC3H1Q5TC82 AC024884.1-201ENST00000620583 399 ntBASIC8.4□□□□□ -1.06
RC3H1Q5TC82 AC007792.1-201ENST00000623023 402 ntBASIC8.4□□□□□ -1.06
RC3H1Q5TC82 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
RC3H1Q5TC82 SNX18P12-201ENST00000624821 759 ntBASIC8.4□□□□□ -1.06
RC3H1Q5TC82 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC8.4□□□□□ -1.06
RC3H1Q5TC82 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
RC3H1Q5TC82 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
RC3H1Q5TC82 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC8.4□□□□□ -1.06
RC3H1Q5TC82 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC8.4□□□□□ -1.07
RC3H1Q5TC82 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
RC3H1Q5TC82 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
RC3H1Q5TC82 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
RC3H1Q5TC82 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
RC3H1Q5TC82 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC8.4□□□□□ -1.07
RC3H1Q5TC82 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
RC3H1Q5TC82 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
RC3H1Q5TC82 AL645937.1-201ENST00000641739 1652 ntBASIC8.4□□□□□ -1.07
RC3H1Q5TC82 BX284613.1-201ENST00000452221 1641 ntBASIC8.4□□□□□ -1.07
RC3H1Q5TC82 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 LYARP1-201ENST00000436977 1501 ntBASIC8.39□□□□□ -1.07
RC3H1Q5TC82 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 CASC19-205ENST00000641013 1411 ntBASIC8.39□□□□□ -1.07
RC3H1Q5TC82 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 RN7SKP271-201ENST00000410528 320 ntBASIC8.39□□□□□ -1.07
RC3H1Q5TC82 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 MTND4LP10-201ENST00000435146 291 ntBASIC8.39□□□□□ -1.07
RC3H1Q5TC82 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 AC097463.1-201ENST00000447288 481 ntBASIC8.39□□□□□ -1.07
RC3H1Q5TC82 CST12P-201ENST00000457644 362 ntBASIC8.39□□□□□ -1.07
RC3H1Q5TC82 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms