Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC140172.1-201ENST00000502928 141 ntBASIC6.01□□□□□ -1.45
GABPAQ06546 BTF3P13-201ENST00000513224 490 ntBASIC6.01□□□□□ -1.45
GABPAQ06546 CDH12P4-201ENST00000517835 295 ntBASIC6.01□□□□□ -1.45
GABPAQ06546 CDH12P3-201ENST00000517935 295 ntBASIC6.01□□□□□ -1.45
GABPAQ06546 CDH12P1-201ENST00000518435 295 ntBASIC6.01□□□□□ -1.45
GABPAQ06546 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.01□□□□□ -1.45
GABPAQ06546 AC021006.3-201ENST00000530771 192 ntBASIC6.01□□□□□ -1.45
GABPAQ06546 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.01□□□□□ -1.45
GABPAQ06546 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.01□□□□□ -1.45
GABPAQ06546 GCSHP4-201ENST00000538792 439 ntBASIC6.01□□□□□ -1.45
GABPAQ06546 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
GABPAQ06546 AC009117.1-201ENST00000563948 554 ntBASIC6.01□□□□□ -1.45
GABPAQ06546 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.01□□□□□ -1.45
GABPAQ06546 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.01□□□□□ -1.45
GABPAQ06546 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
GABPAQ06546 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.01□□□□□ -1.45
GABPAQ06546 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.01□□□□□ -1.45
GABPAQ06546 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
GABPAQ06546 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
GABPAQ06546 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.01□□□□□ -1.45
GABPAQ06546 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.01□□□□□ -1.45
GABPAQ06546 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
GABPAQ06546 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
GABPAQ06546 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
GABPAQ06546 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6□□□□□ -1.45
GABPAQ06546 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6□□□□□ -1.45
GABPAQ06546 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6□□□□□ -1.45
GABPAQ06546 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6□□□□□ -1.45
GABPAQ06546 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
GABPAQ06546 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
GABPAQ06546 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
GABPAQ06546 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
GABPAQ06546 AL360270.2-201ENST00000562952 5985 ntBASIC6□□□□□ -1.45
GABPAQ06546 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6□□□□□ -1.45
GABPAQ06546 RN7SKP149-201ENST00000363008 344 ntBASIC6□□□□□ -1.45
GABPAQ06546 AL353625.1-202ENST00000366273 571 ntBASIC6□□□□□ -1.45
GABPAQ06546 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6□□□□□ -1.45
GABPAQ06546 AL139128.1-201ENST00000413921 941 ntBASIC6□□□□□ -1.45
GABPAQ06546 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6□□□□□ -1.45
GABPAQ06546 AL360081.1-201ENST00000428299 555 ntBASIC6□□□□□ -1.45
GABPAQ06546 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6□□□□□ -1.45
GABPAQ06546 NPM1P18-201ENST00000434232 732 ntBASIC6□□□□□ -1.45
GABPAQ06546 AC090018.1-201ENST00000434369 367 ntBASIC6□□□□□ -1.45
GABPAQ06546 RPL7P11-201ENST00000437586 658 ntBASIC6□□□□□ -1.45
GABPAQ06546 OR7E125P-201ENST00000443450 846 ntBASIC6□□□□□ -1.45
GABPAQ06546 AL354714.3-201ENST00000447284 493 ntBASIC6□□□□□ -1.45
GABPAQ06546 BX842559.2-201ENST00000451418 605 ntBASIC6□□□□□ -1.45
GABPAQ06546 AC128716.1-201ENST00000475129 166 ntBASIC6□□□□□ -1.45
GABPAQ06546 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6□□□□□ -1.45
GABPAQ06546 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6□□□□□ -1.45
GABPAQ06546 AC019322.1-201ENST00000571869 389 ntBASIC6□□□□□ -1.45
GABPAQ06546 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6□□□□□ -1.45
GABPAQ06546 BNIP3P35-201ENST00000604530 490 ntBASIC6□□□□□ -1.45
GABPAQ06546 AL356752.1-201ENST00000615844 593 ntBASIC6□□□□□ -1.45
GABPAQ06546 AC100827.5-201ENST00000615883 426 ntBASIC6□□□□□ -1.45
GABPAQ06546 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6□□□□□ -1.45
GABPAQ06546 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6□□□□□ -1.45
GABPAQ06546 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
GABPAQ06546 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
GABPAQ06546 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
GABPAQ06546 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
GABPAQ06546 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6□□□□□ -1.45
GABPAQ06546 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6□□□□□ -1.45
GABPAQ06546 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6□□□□□ -1.45
GABPAQ06546 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
GABPAQ06546 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.99□□□□□ -1.45
GABPAQ06546 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.99□□□□□ -1.45
GABPAQ06546 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
GABPAQ06546 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
GABPAQ06546 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
GABPAQ06546 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
GABPAQ06546 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.99□□□□□ -1.45
GABPAQ06546 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.99□□□□□ -1.45
GABPAQ06546 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.99□□□□□ -1.45
GABPAQ06546 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.99□□□□□ -1.45
GABPAQ06546 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.99□□□□□ -1.45
GABPAQ06546 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
GABPAQ06546 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
GABPAQ06546 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.99□□□□□ -1.45
GABPAQ06546 RNVU1-6-201ENST00000364688 164 ntBASIC5.99□□□□□ -1.45
GABPAQ06546 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
GABPAQ06546 SNORA66-201ENST00000384792 133 ntBASIC5.99□□□□□ -1.45
GABPAQ06546 RNA5SP241-201ENST00000391326 114 ntBASIC5.99□□□□□ -1.45
GABPAQ06546 AP002530.1-201ENST00000405705 684 ntBASIC5.99□□□□□ -1.45
GABPAQ06546 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
GABPAQ06546 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.99□□□□□ -1.45
GABPAQ06546 FABP7P2-201ENST00000429946 379 ntBASIC5.99□□□□□ -1.45
GABPAQ06546 MTND2P40-201ENST00000436718 841 ntBASIC5.99□□□□□ -1.45
GABPAQ06546 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.99□□□□□ -1.45
GABPAQ06546 TCEA1P1-201ENST00000449716 880 ntBASIC5.99□□□□□ -1.45
GABPAQ06546 GAPDHP14-201ENST00000450472 937 ntBASIC5.99□□□□□ -1.45
GABPAQ06546 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.99□□□□□ -1.45
GABPAQ06546 RN7SL443P-201ENST00000464331 290 ntBASIC5.99□□□□□ -1.45
GABPAQ06546 AC083982.1-201ENST00000485679 344 ntBASIC5.99□□□□□ -1.45
GABPAQ06546 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.99□□□□□ -1.45
GABPAQ06546 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.99□□□□□ -1.45
GABPAQ06546 AC010350.1-201ENST00000504908 231 ntBASIC5.99□□□□□ -1.45
GABPAQ06546 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.99□□□□□ -1.45
GABPAQ06546 AC027369.5-201ENST00000533838 755 ntBASIC5.99□□□□□ -1.45
GABPAQ06546 NMNAT1P1-201ENST00000554095 876 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms