Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RN7SKP199-201ENST00000410325 305 ntBASIC5.7□□□□□ -1.5
TPM4P67936 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.7□□□□□ -1.5
TPM4P67936 AL596448.1-201ENST00000415024 392 ntBASIC5.7□□□□□ -1.5
TPM4P67936 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.7□□□□□ -1.5
TPM4P67936 BMS1P17-202ENST00000416720 316 ntBASIC5.7□□□□□ -1.5
TPM4P67936 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.7□□□□□ -1.5
TPM4P67936 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.7□□□□□ -1.5
TPM4P67936 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.7□□□□□ -1.5
TPM4P67936 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.7□□□□□ -1.5
TPM4P67936 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.7□□□□□ -1.5
TPM4P67936 AC092447.2-201ENST00000435487 669 ntBASIC5.7□□□□□ -1.5
TPM4P67936 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.7□□□□□ -1.5
TPM4P67936 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.7□□□□□ -1.5
TPM4P67936 AC073476.1-201ENST00000452854 407 ntBASIC5.7□□□□□ -1.5
TPM4P67936 AC020779.1-201ENST00000478757 796 ntBASIC5.7□□□□□ -1.5
TPM4P67936 RN7SL441P-201ENST00000492388 296 ntBASIC5.7□□□□□ -1.5
TPM4P67936 AC138866.2-201ENST00000508650 584 ntBASIC5.7□□□□□ -1.5
TPM4P67936 RNA5SP464-201ENST00000516251 108 ntBASIC5.7□□□□□ -1.5
TPM4P67936 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.7□□□□□ -1.5
TPM4P67936 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.7□□□□□ -1.5
TPM4P67936 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.7□□□□□ -1.5
TPM4P67936 OR10D4P-201ENST00000525892 951 ntBASIC5.7□□□□□ -1.5
TPM4P67936 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.7□□□□□ -1.5
TPM4P67936 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.7□□□□□ -1.5
TPM4P67936 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.7□□□□□ -1.5
TPM4P67936 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.7□□□□□ -1.5
TPM4P67936 AC000068.2-201ENST00000608816 460 ntBASIC5.7□□□□□ -1.5
TPM4P67936 CU639417.4-201ENST00000623928 207 ntBASIC5.7□□□□□ -1.5
TPM4P67936 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.7□□□□□ -1.5
TPM4P67936 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TPM4P67936 AL034370.1-201ENST00000397254 1590 ntBASIC5.7□□□□□ -1.5
TPM4P67936 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TPM4P67936 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TPM4P67936 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TPM4P67936 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.7□□□□□ -1.5
TPM4P67936 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.7□□□□□ -1.5
TPM4P67936 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TPM4P67936 MAPK10-349ENST00000641767 3661 ntBASIC5.69□□□□□ -1.5
TPM4P67936 OR13C1P-202ENST00000641378 2919 ntBASIC5.69□□□□□ -1.5
TPM4P67936 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
TPM4P67936 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TPM4P67936 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TPM4P67936 RN7SKP113-201ENST00000363891 295 ntBASIC5.69□□□□□ -1.5
TPM4P67936 RN7SKP275-201ENST00000364626 301 ntBASIC5.69□□□□□ -1.5
TPM4P67936 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TPM4P67936 AL050305.1-201ENST00000399993 1230 ntBASIC5.69□□□□□ -1.5
TPM4P67936 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.69□□□□□ -1.5
TPM4P67936 OR4K12P-201ENST00000406538 961 ntBASIC5.69□□□□□ -1.5
TPM4P67936 CDY8P-201ENST00000428380 1279 ntBASIC5.69□□□□□ -1.5
TPM4P67936 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.69□□□□□ -1.5
TPM4P67936 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.69□□□□□ -1.5
TPM4P67936 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TPM4P67936 CDY20P-201ENST00000447528 1279 ntBASIC5.69□□□□□ -1.5
TPM4P67936 AC006499.4-201ENST00000510947 694 ntBASIC5.69□□□□□ -1.5
TPM4P67936 RN7SKP183-201ENST00000517169 324 ntBASIC5.69□□□□□ -1.5
TPM4P67936 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TPM4P67936 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.69□□□□□ -1.5
TPM4P67936 RBM22P1-201ENST00000578589 1214 ntBASIC5.69□□□□□ -1.5
TPM4P67936 AL451049.1-201ENST00000608672 497 ntBASIC5.69□□□□□ -1.5
TPM4P67936 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.69□□□□□ -1.5
TPM4P67936 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.69□□□□□ -1.5
TPM4P67936 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.69□□□□□ -1.5
TPM4P67936 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TPM4P67936 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TPM4P67936 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TPM4P67936 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.69□□□□□ -1.5
TPM4P67936 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
TPM4P67936 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TPM4P67936 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TPM4P67936 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TPM4P67936 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.68□□□□□ -1.5
TPM4P67936 AL513548.1-201ENST00000562904 1724 ntBASIC5.68□□□□□ -1.5
TPM4P67936 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TPM4P67936 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TPM4P67936 SOCS5P3-201ENST00000425115 1576 ntBASIC5.68□□□□□ -1.5
TPM4P67936 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
TPM4P67936 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TPM4P67936 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TPM4P67936 RNU6-249P-201ENST00000363016 102 ntBASIC5.68□□□□□ -1.5
TPM4P67936 RNU1-146P-201ENST00000364015 165 ntBASIC5.68□□□□□ -1.5
TPM4P67936 AC013410.1-201ENST00000436223 1232 ntBASIC5.68□□□□□ -1.5
TPM4P67936 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.68□□□□□ -1.5
TPM4P67936 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.68□□□□□ -1.5
TPM4P67936 CTSLP6-201ENST00000458273 1002 ntBASIC5.68□□□□□ -1.5
TPM4P67936 AC112206.1-201ENST00000468416 477 ntBASIC5.68□□□□□ -1.5
TPM4P67936 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TPM4P67936 ARL4AP1-201ENST00000503220 705 ntBASIC5.68□□□□□ -1.5
TPM4P67936 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.68□□□□□ -1.5
TPM4P67936 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.68□□□□□ -1.5
TPM4P67936 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TPM4P67936 ENPP7P9-201ENST00000514456 627 ntBASIC5.68□□□□□ -1.5
TPM4P67936 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.68□□□□□ -1.5
TPM4P67936 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.68□□□□□ -1.5
TPM4P67936 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.68□□□□□ -1.5
TPM4P67936 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.68□□□□□ -1.5
TPM4P67936 AL049830.4-201ENST00000555149 351 ntBASIC5.68□□□□□ -1.5
TPM4P67936 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.68□□□□□ -1.5
TPM4P67936 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.68□□□□□ -1.5
TPM4P67936 AL138895.2-201ENST00000603019 178 ntBASIC5.68□□□□□ -1.5
TPM4P67936 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms