Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.37□□□□□ -1.55
CDH6P55285 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH6P55285 AC006349.1-201ENST00000555526 235 ntBASIC5.37□□□□□ -1.55
CDH6P55285 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDH6P55285 AC019322.1-201ENST00000571869 389 ntBASIC5.37□□□□□ -1.55
CDH6P55285 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH6P55285 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH6P55285 AP005131.7-201ENST00000610087 611 ntBASIC5.37□□□□□ -1.55
CDH6P55285 AC022467.1-201ENST00000614738 749 ntBASIC5.37□□□□□ -1.55
CDH6P55285 AL122125.1-201ENST00000616999 600 ntBASIC5.37□□□□□ -1.55
CDH6P55285 AC090527.3-201ENST00000619041 548 ntBASIC5.37□□□□□ -1.55
CDH6P55285 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH6P55285 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH6P55285 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH6P55285 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH6P55285 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH6P55285 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CDH6P55285 AC004817.4-201ENST00000602396 3625 ntBASIC5.37□□□□□ -1.55
CDH6P55285 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CDH6P55285 AC011493.1-201ENST00000596753 1632 ntBASIC5.37□□□□□ -1.55
CDH6P55285 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDH6P55285 AC093909.5-201ENST00000621839 1799 ntBASIC5.37□□□□□ -1.55
CDH6P55285 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CDH6P55285 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH6P55285 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH6P55285 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH6P55285 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH6P55285 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH6P55285 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CDH6P55285 MIR600-201ENST00000385007 98 ntBASIC5.36□□□□□ -1.55
CDH6P55285 AL035079.1-201ENST00000405210 287 ntBASIC5.36□□□□□ -1.55
CDH6P55285 AL358178.1-201ENST00000407698 397 ntBASIC5.36□□□□□ -1.55
CDH6P55285 MIR1286-201ENST00000408112 78 ntBASIC5.36□□□□□ -1.55
CDH6P55285 MARK2P12-201ENST00000420129 585 ntBASIC5.36□□□□□ -1.55
CDH6P55285 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH6P55285 RPS4XP16-201ENST00000427198 791 ntBASIC5.36□□□□□ -1.55
CDH6P55285 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH6P55285 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH6P55285 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH6P55285 AC021660.1-201ENST00000465006 554 ntBASIC5.36□□□□□ -1.55
CDH6P55285 RPS21P4-201ENST00000487122 248 ntBASIC5.36□□□□□ -1.55
CDH6P55285 AC024558.1-201ENST00000505008 528 ntBASIC5.36□□□□□ -1.55
CDH6P55285 FTH1P11-201ENST00000517577 551 ntBASIC5.36□□□□□ -1.55
CDH6P55285 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH6P55285 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.36□□□□□ -1.55
CDH6P55285 AL359219.2-201ENST00000555184 348 ntBASIC5.36□□□□□ -1.55
CDH6P55285 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
CDH6P55285 AC006272.2-201ENST00000594725 163 ntBASIC5.36□□□□□ -1.55
CDH6P55285 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.36□□□□□ -1.55
CDH6P55285 AC108359.1-201ENST00000616451 1211 ntBASIC5.36□□□□□ -1.55
CDH6P55285 AC008115.4-201ENST00000619780 775 ntBASIC5.36□□□□□ -1.55
CDH6P55285 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH6P55285 AC235565.1-201ENST00000456962 1325 ntBASIC5.36□□□□□ -1.55
CDH6P55285 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CDH6P55285 AL603750.1-201ENST00000624216 1717 ntBASIC5.36□□□□□ -1.55
CDH6P55285 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDH6P55285 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
CDH6P55285 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CDH6P55285 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH6P55285 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CDH6P55285 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
CDH6P55285 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDH6P55285 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDH6P55285 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
CDH6P55285 HSPA8P14-201ENST00000552265 1805 ntBASIC5.35□□□□□ -1.55
CDH6P55285 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDH6P55285 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDH6P55285 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.35□□□□□ -1.55
CDH6P55285 U3.2-201ENST00000362981 210 ntBASIC5.35□□□□□ -1.55
CDH6P55285 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CDH6P55285 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH6P55285 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.35□□□□□ -1.55
CDH6P55285 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH6P55285 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.35□□□□□ -1.55
CDH6P55285 AL606490.1-201ENST00000452266 765 ntBASIC5.35□□□□□ -1.55
CDH6P55285 COPS8P2-201ENST00000473228 627 ntBASIC5.35□□□□□ -1.55
CDH6P55285 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH6P55285 AC134349.2-201ENST00000535136 910 ntBASIC5.35□□□□□ -1.55
CDH6P55285 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH6P55285 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.35□□□□□ -1.55
CDH6P55285 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH6P55285 AC010547.7-201ENST00000570323 333 ntBASIC5.35□□□□□ -1.55
CDH6P55285 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH6P55285 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH6P55285 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH6P55285 AL512329.2-201ENST00000607350 548 ntBASIC5.35□□□□□ -1.55
CDH6P55285 MIR6862-1-201ENST00000613016 70 ntBASIC5.35□□□□□ -1.55
CDH6P55285 MIR6862-2-201ENST00000614755 70 ntBASIC5.35□□□□□ -1.55
CDH6P55285 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH6P55285 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH6P55285 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CDH6P55285 AC073136.1-201ENST00000449426 2884 ntBASIC5.35□□□□□ -1.55
CDH6P55285 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDH6P55285 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CDH6P55285 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.35□□□□□ -1.55
CDH6P55285 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CDH6P55285 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDH6P55285 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.34□□□□□ -1.55
CDH6P55285 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH6P55285 MTCO1P11-201ENST00000429111 1528 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms