Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.52□□□□□ -1.53
NR1H2P55055 IGKV3D-34-201ENST00000522638 302 ntBASIC5.52□□□□□ -1.53
NR1H2P55055 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.52□□□□□ -1.53
NR1H2P55055 AP003102.1-201ENST00000525638 661 ntBASIC5.52□□□□□ -1.53
NR1H2P55055 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.52□□□□□ -1.53
NR1H2P55055 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.52□□□□□ -1.53
NR1H2P55055 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.52□□□□□ -1.53
NR1H2P55055 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.52□□□□□ -1.53
NR1H2P55055 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.52□□□□□ -1.53
NR1H2P55055 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.52□□□□□ -1.53
NR1H2P55055 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.52□□□□□ -1.53
NR1H2P55055 AC008521.2-201ENST00000591021 259 ntBASIC5.52□□□□□ -1.53
NR1H2P55055 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.52□□□□□ -1.53
NR1H2P55055 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.52□□□□□ -1.53
NR1H2P55055 AL513327.3-201ENST00000602618 469 ntBASIC5.52□□□□□ -1.53
NR1H2P55055 AC073046.2-201ENST00000604756 527 ntBASIC5.52□□□□□ -1.53
NR1H2P55055 AC092681.3-201ENST00000609463 678 ntBASIC5.52□□□□□ -1.53
NR1H2P55055 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.52□□□□□ -1.53
NR1H2P55055 AL359513.1-201ENST00000614364 557 ntBASIC5.52□□□□□ -1.53
NR1H2P55055 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.52□□□□□ -1.53
NR1H2P55055 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NR1H2P55055 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.52□□□□□ -1.53
NR1H2P55055 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
NR1H2P55055 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NR1H2P55055 AC130304.1-201ENST00000622942 2385 ntBASIC5.52□□□□□ -1.53
NR1H2P55055 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.52□□□□□ -1.53
NR1H2P55055 AC007938.2-201ENST00000604666 2634 ntBASIC5.52□□□□□ -1.53
NR1H2P55055 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
NR1H2P55055 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
NR1H2P55055 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NR1H2P55055 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
NR1H2P55055 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NR1H2P55055 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
NR1H2P55055 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NR1H2P55055 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NR1H2P55055 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.51□□□□□ -1.53
NR1H2P55055 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
NR1H2P55055 GVINP1-202ENST00000531871 7271 ntBASIC5.51□□□□□ -1.53
NR1H2P55055 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NR1H2P55055 BX005019.1-201ENST00000561881 1810 ntBASIC5.51□□□□□ -1.53
NR1H2P55055 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.51□□□□□ -1.53
NR1H2P55055 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.51□□□□□ -1.53
NR1H2P55055 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.51□□□□□ -1.53
NR1H2P55055 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
NR1H2P55055 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
NR1H2P55055 GCNT6-201ENST00000379591 934 ntBASIC5.51□□□□□ -1.53
NR1H2P55055 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
NR1H2P55055 RNU4-27P-201ENST00000410889 139 ntBASIC5.51□□□□□ -1.53
NR1H2P55055 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.51□□□□□ -1.53
NR1H2P55055 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.51□□□□□ -1.53
NR1H2P55055 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.51□□□□□ -1.53
NR1H2P55055 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.51□□□□□ -1.53
NR1H2P55055 HYALP1-201ENST00000417674 1279 ntBASIC5.51□□□□□ -1.53
NR1H2P55055 MTCO3P4-201ENST00000419236 787 ntBASIC5.51□□□□□ -1.53
NR1H2P55055 AC009784.1-201ENST00000426484 460 ntBASIC5.51□□□□□ -1.53
NR1H2P55055 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.51□□□□□ -1.53
NR1H2P55055 AL353093.1-201ENST00000441292 436 ntBASIC5.51□□□□□ -1.53
NR1H2P55055 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.51□□□□□ -1.53
NR1H2P55055 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC5.51□□□□□ -1.53
NR1H2P55055 RPS4XP12-201ENST00000461747 709 ntBASIC5.51□□□□□ -1.53
NR1H2P55055 AC008379.1-201ENST00000463655 464 ntBASIC5.51□□□□□ -1.53
NR1H2P55055 RN7SL326P-201ENST00000477493 296 ntBASIC5.51□□□□□ -1.53
NR1H2P55055 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NR1H2P55055 OR4D12P-201ENST00000509361 911 ntBASIC5.51□□□□□ -1.53
NR1H2P55055 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.51□□□□□ -1.53
NR1H2P55055 AC121161.1-201ENST00000510606 652 ntBASIC5.51□□□□□ -1.53
NR1H2P55055 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.51□□□□□ -1.53
NR1H2P55055 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.51□□□□□ -1.53
NR1H2P55055 IGKV2D-10-201ENST00000520194 281 ntBASIC5.51□□□□□ -1.53
NR1H2P55055 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.51□□□□□ -1.53
NR1H2P55055 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.51□□□□□ -1.53
NR1H2P55055 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.51□□□□□ -1.53
NR1H2P55055 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.51□□□□□ -1.53
NR1H2P55055 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.51□□□□□ -1.53
NR1H2P55055 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.51□□□□□ -1.53
NR1H2P55055 AC084759.1-201ENST00000561168 290 ntBASIC5.51□□□□□ -1.53
NR1H2P55055 AC104229.1-201ENST00000561364 255 ntBASIC5.51□□□□□ -1.53
NR1H2P55055 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
NR1H2P55055 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.51□□□□□ -1.53
NR1H2P55055 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
NR1H2P55055 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
NR1H2P55055 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.51□□□□□ -1.53
NR1H2P55055 VN1R84P-201ENST00000593697 235 ntBASIC5.51□□□□□ -1.53
NR1H2P55055 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.51□□□□□ -1.53
NR1H2P55055 BNIP3P31-201ENST00000604515 566 ntBASIC5.51□□□□□ -1.53
NR1H2P55055 AP000894.4-201ENST00000610185 483 ntBASIC5.51□□□□□ -1.53
NR1H2P55055 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.51□□□□□ -1.53
NR1H2P55055 AC011755.1-201ENST00000623763 2049 ntBASIC5.51□□□□□ -1.53
NR1H2P55055 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NR1H2P55055 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NR1H2P55055 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
NR1H2P55055 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
NR1H2P55055 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NR1H2P55055 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
NR1H2P55055 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NR1H2P55055 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NR1H2P55055 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NR1H2P55055 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NR1H2P55055 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.5□□□□□ -1.53
NR1H2P55055 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms