Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC6.49□□□□□ -1.37
EPHB3P54753 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
EPHB3P54753 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.49□□□□□ -1.37
EPHB3P54753 AC022325.1-201ENST00000502748 2199 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
EPHB3P54753 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.49□□□□□ -1.37
EPHB3P54753 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
EPHB3P54753 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.49□□□□□ -1.37
EPHB3P54753 CASC19-243ENST00000641588 1546 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
EPHB3P54753 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
EPHB3P54753 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
EPHB3P54753 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.49□□□□□ -1.37
EPHB3P54753 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.49□□□□□ -1.37
EPHB3P54753 ABCA11P-202ENST00000504019 2110 ntBASIC6.49□□□□□ -1.37
EPHB3P54753 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
EPHB3P54753 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
EPHB3P54753 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
EPHB3P54753 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
EPHB3P54753 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.48□□□□□ -1.37
EPHB3P54753 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.48□□□□□ -1.37
EPHB3P54753 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
EPHB3P54753 RNA5SP477-201ENST00000362639 119 ntBASIC6.48□□□□□ -1.37
EPHB3P54753 RN7SKP78-201ENST00000364711 318 ntBASIC6.48□□□□□ -1.37
EPHB3P54753 SNORA43.1-201ENST00000364863 140 ntBASIC6.48□□□□□ -1.37
EPHB3P54753 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
EPHB3P54753 RNU6-796P-201ENST00000391086 107 ntBASIC6.48□□□□□ -1.37
EPHB3P54753 OR8G2P-201ENST00000412796 908 ntBASIC6.48□□□□□ -1.37
EPHB3P54753 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC6.48□□□□□ -1.37
EPHB3P54753 MTCO1P45-201ENST00000431457 267 ntBASIC6.48□□□□□ -1.37
EPHB3P54753 AL365220.1-201ENST00000432923 399 ntBASIC6.48□□□□□ -1.37
EPHB3P54753 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.48□□□□□ -1.37
EPHB3P54753 FTLP8-201ENST00000446770 267 ntBASIC6.48□□□□□ -1.37
EPHB3P54753 AC005077.1-201ENST00000449226 375 ntBASIC6.48□□□□□ -1.37
EPHB3P54753 Z95152.1-201ENST00000453556 656 ntBASIC6.48□□□□□ -1.37
EPHB3P54753 RPL7P51-201ENST00000490532 749 ntBASIC6.48□□□□□ -1.37
EPHB3P54753 AC104109.1-201ENST00000498563 436 ntBASIC6.48□□□□□ -1.37
EPHB3P54753 AC093890.1-201ENST00000502554 540 ntBASIC6.48□□□□□ -1.37
EPHB3P54753 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.48□□□□□ -1.37
EPHB3P54753 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.48□□□□□ -1.37
EPHB3P54753 RNA5SP400-201ENST00000517155 111 ntBASIC6.48□□□□□ -1.37
EPHB3P54753 TMEM97P2-201ENST00000517841 403 ntBASIC6.48□□□□□ -1.37
EPHB3P54753 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.48□□□□□ -1.37
EPHB3P54753 PTK2-220ENST00000520151 573 ntTSL 4 BASIC6.48□□□□□ -1.37
EPHB3P54753 OR8G3P-201ENST00000533406 921 ntBASIC6.48□□□□□ -1.37
EPHB3P54753 PDCL2P2-201ENST00000533651 189 ntBASIC6.48□□□□□ -1.37
EPHB3P54753 AC244502.2-201ENST00000543361 851 ntBASIC6.48□□□□□ -1.37
EPHB3P54753 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.48□□□□□ -1.37
EPHB3P54753 AC087897.1-201ENST00000550134 156 ntBASIC6.48□□□□□ -1.37
EPHB3P54753 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.48□□□□□ -1.37
EPHB3P54753 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC6.48□□□□□ -1.37
EPHB3P54753 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.48□□□□□ -1.37
EPHB3P54753 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.48□□□□□ -1.37
EPHB3P54753 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.48□□□□□ -1.37
EPHB3P54753 AC012417.1-201ENST00000582307 1039 ntBASIC6.48□□□□□ -1.37
EPHB3P54753 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
EPHB3P54753 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.48□□□□□ -1.37
EPHB3P54753 AF131215.7-201ENST00000602443 707 ntBASIC6.48□□□□□ -1.37
EPHB3P54753 AC100767.2-201ENST00000604840 693 ntBASIC6.48□□□□□ -1.37
EPHB3P54753 AC008555.7-201ENST00000605008 583 ntBASIC6.48□□□□□ -1.37
EPHB3P54753 AL513218.1-201ENST00000606527 391 ntBASIC6.48□□□□□ -1.37
EPHB3P54753 AP003392.5-201ENST00000607857 415 ntBASIC6.48□□□□□ -1.37
EPHB3P54753 AL356121.2-201ENST00000624715 780 ntBASIC6.48□□□□□ -1.37
EPHB3P54753 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.48□□□□□ -1.37
EPHB3P54753 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.48□□□□□ -1.37
EPHB3P54753 AC099654.10-201ENST00000640395 161 ntBASIC6.48□□□□□ -1.37
EPHB3P54753 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.48□□□□□ -1.37
EPHB3P54753 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.48□□□□□ -1.37
EPHB3P54753 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
EPHB3P54753 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
EPHB3P54753 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.48□□□□□ -1.37
EPHB3P54753 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.48□□□□□ -1.37
EPHB3P54753 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
EPHB3P54753 AL157831.2-201ENST00000564681 3095 ntBASIC6.48□□□□□ -1.37
EPHB3P54753 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
EPHB3P54753 RAD17P2-201ENST00000451754 1977 ntBASIC6.48□□□□□ -1.37
EPHB3P54753 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
EPHB3P54753 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.47□□□□□ -1.37
EPHB3P54753 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
EPHB3P54753 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
EPHB3P54753 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
EPHB3P54753 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
EPHB3P54753 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
EPHB3P54753 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.47□□□□□ -1.37
EPHB3P54753 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.47□□□□□ -1.37
EPHB3P54753 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
EPHB3P54753 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
EPHB3P54753 OR11H13P-201ENST00000359695 979 ntBASIC6.47□□□□□ -1.37
EPHB3P54753 RNU4-51P-201ENST00000364206 140 ntBASIC6.47□□□□□ -1.37
EPHB3P54753 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.47□□□□□ -1.37
EPHB3P54753 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.47□□□□□ -1.37
EPHB3P54753 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC6.47□□□□□ -1.37
EPHB3P54753 RPL12P12-201ENST00000424633 501 ntBASIC6.47□□□□□ -1.37
EPHB3P54753 AL593851.1-201ENST00000426171 157 ntBASIC6.47□□□□□ -1.37
EPHB3P54753 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC6.47□□□□□ -1.37
EPHB3P54753 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC6.47□□□□□ -1.37
EPHB3P54753 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC6.47□□□□□ -1.37
EPHB3P54753 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.47□□□□□ -1.37
EPHB3P54753 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.47□□□□□ -1.37
EPHB3P54753 NANOGP2-201ENST00000435391 727 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms