Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.72□□□□□ -1.49
RAD23BP54727 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.72□□□□□ -1.49
RAD23BP54727 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RAD23BP54727 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.72□□□□□ -1.49
RAD23BP54727 MIR7853-201ENST00000584820 132 ntBASIC5.72□□□□□ -1.49
RAD23BP54727 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.72□□□□□ -1.49
RAD23BP54727 FKBP1AP1-201ENST00000594588 318 ntBASIC5.72□□□□□ -1.49
RAD23BP54727 AL162574.1-201ENST00000615702 950 ntBASIC5.72□□□□□ -1.49
RAD23BP54727 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RAD23BP54727 AP003400.3-201ENST00000624904 346 ntBASIC5.72□□□□□ -1.49
RAD23BP54727 AC099654.6-201ENST00000636487 512 ntBASIC5.72□□□□□ -1.49
RAD23BP54727 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.72□□□□□ -1.49
RAD23BP54727 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RAD23BP54727 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
RAD23BP54727 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RAD23BP54727 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
RAD23BP54727 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RAD23BP54727 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RAD23BP54727 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.71□□□□□ -1.49
RAD23BP54727 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
RAD23BP54727 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.71□□□□□ -1.49
RAD23BP54727 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
RAD23BP54727 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RAD23BP54727 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.71□□□□□ -1.5
RAD23BP54727 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
RAD23BP54727 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RAD23BP54727 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RAD23BP54727 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RAD23BP54727 RNU6-1331P-201ENST00000363658 106 ntBASIC5.71□□□□□ -1.5
RAD23BP54727 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RAD23BP54727 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
RAD23BP54727 AL391361.1-201ENST00000405580 489 ntBASIC5.71□□□□□ -1.5
RAD23BP54727 RPL35AP24-201ENST00000413846 330 ntBASIC5.71□□□□□ -1.5
RAD23BP54727 NPM1P4-201ENST00000414095 812 ntBASIC5.71□□□□□ -1.5
RAD23BP54727 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.71□□□□□ -1.5
RAD23BP54727 AC013470.3-201ENST00000420252 1194 ntBASIC5.71□□□□□ -1.5
RAD23BP54727 AL133325.1-201ENST00000421090 382 ntBASIC5.71□□□□□ -1.5
RAD23BP54727 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC5.71□□□□□ -1.5
RAD23BP54727 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.71□□□□□ -1.5
RAD23BP54727 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.71□□□□□ -1.5
RAD23BP54727 AC016687.1-201ENST00000482574 353 ntBASIC5.71□□□□□ -1.5
RAD23BP54727 UBA52P7-201ENST00000486088 380 ntBASIC5.71□□□□□ -1.5
RAD23BP54727 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RAD23BP54727 OR9N1P-201ENST00000491296 333 ntBASIC5.71□□□□□ -1.5
RAD23BP54727 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC5.71□□□□□ -1.5
RAD23BP54727 RPS26P24-201ENST00000497656 331 ntBASIC5.71□□□□□ -1.5
RAD23BP54727 RNA5SP373-201ENST00000517271 95 ntBASIC5.71□□□□□ -1.5
RAD23BP54727 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.71□□□□□ -1.5
RAD23BP54727 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RAD23BP54727 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.71□□□□□ -1.5
RAD23BP54727 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.71□□□□□ -1.5
RAD23BP54727 LSM3P2-201ENST00000551246 273 ntBASIC5.71□□□□□ -1.5
RAD23BP54727 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RAD23BP54727 MIR3176-201ENST00000582210 90 ntBASIC5.71□□□□□ -1.5
RAD23BP54727 AC092953.2-201ENST00000608000 699 ntBASIC5.71□□□□□ -1.5
RAD23BP54727 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.71□□□□□ -1.5
RAD23BP54727 AC022467.1-201ENST00000614738 749 ntBASIC5.71□□□□□ -1.5
RAD23BP54727 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RAD23BP54727 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.71□□□□□ -1.5
RAD23BP54727 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RAD23BP54727 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RAD23BP54727 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.71□□□□□ -1.5
RAD23BP54727 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RAD23BP54727 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RAD23BP54727 AL929601.4-201ENST00000613011 1341 ntBASIC5.71□□□□□ -1.5
RAD23BP54727 AL360270.2-201ENST00000562952 5985 ntBASIC5.71□□□□□ -1.5
RAD23BP54727 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
RAD23BP54727 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.7□□□□□ -1.5
RAD23BP54727 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.7□□□□□ -1.5
RAD23BP54727 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RAD23BP54727 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
RAD23BP54727 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RAD23BP54727 U3.7-201ENST00000363668 216 ntBASIC5.7□□□□□ -1.5
RAD23BP54727 RNA5SP487-201ENST00000410186 122 ntBASIC5.7□□□□□ -1.5
RAD23BP54727 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.7□□□□□ -1.5
RAD23BP54727 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RAD23BP54727 AC017019.1-201ENST00000426129 261 ntBASIC5.7□□□□□ -1.5
RAD23BP54727 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.7□□□□□ -1.5
RAD23BP54727 RPL7L1P9-201ENST00000431298 745 ntBASIC5.7□□□□□ -1.5
RAD23BP54727 RPL17P35-201ENST00000432217 549 ntBASIC5.7□□□□□ -1.5
RAD23BP54727 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RAD23BP54727 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.7□□□□□ -1.5
RAD23BP54727 RN7SL447P-201ENST00000494711 245 ntBASIC5.7□□□□□ -1.5
RAD23BP54727 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.7□□□□□ -1.5
RAD23BP54727 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC5.7□□□□□ -1.5
RAD23BP54727 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.7□□□□□ -1.5
RAD23BP54727 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.7□□□□□ -1.5
RAD23BP54727 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
RAD23BP54727 BX510359.5-201ENST00000515651 304 ntBASIC5.7□□□□□ -1.5
RAD23BP54727 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.7□□□□□ -1.5
RAD23BP54727 RNU6-941P-201ENST00000516346 108 ntBASIC5.7□□□□□ -1.5
RAD23BP54727 FTH1P11-201ENST00000517577 551 ntBASIC5.7□□□□□ -1.5
RAD23BP54727 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.7□□□□□ -1.5
RAD23BP54727 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.7□□□□□ -1.5
RAD23BP54727 AC005000.1-201ENST00000536192 288 ntBASIC5.7□□□□□ -1.5
RAD23BP54727 YWHABP2-201ENST00000540201 713 ntBASIC5.7□□□□□ -1.5
RAD23BP54727 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RAD23BP54727 RPL10P14-201ENST00000565265 298 ntBASIC5.7□□□□□ -1.5
RAD23BP54727 AC016839.1-201ENST00000578162 867 ntBASIC5.7□□□□□ -1.5
RAD23BP54727 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms