Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 RBBP4P1-201ENST00000502424 1276 ntBASIC4.73□□□□□ -1.65
HOXA1P49639 TRAV31-201ENST00000502780 342 ntBASIC4.73□□□□□ -1.65
HOXA1P49639 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.73□□□□□ -1.65
HOXA1P49639 AC021146.7-201ENST00000509604 775 ntBASIC4.73□□□□□ -1.65
HOXA1P49639 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC4.73□□□□□ -1.65
HOXA1P49639 CIR1P1-201ENST00000524055 1133 ntBASIC4.73□□□□□ -1.65
HOXA1P49639 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HOXA1P49639 AC130365.2-201ENST00000525882 1201 ntBASIC4.73□□□□□ -1.65
HOXA1P49639 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.73□□□□□ -1.65
HOXA1P49639 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.73□□□□□ -1.65
HOXA1P49639 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXA1P49639 AL121594.2-201ENST00000541658 472 ntBASIC4.73□□□□□ -1.65
HOXA1P49639 MTND1P24-201ENST00000552175 861 ntBASIC4.73□□□□□ -1.65
HOXA1P49639 AC025918.2-201ENST00000558683 763 ntBASIC4.73□□□□□ -1.65
HOXA1P49639 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.73□□□□□ -1.65
HOXA1P49639 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC4.73□□□□□ -1.65
HOXA1P49639 AGGF1P9-201ENST00000561884 913 ntBASIC4.73□□□□□ -1.65
HOXA1P49639 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
HOXA1P49639 RN7SL66P-201ENST00000582099 264 ntBASIC4.73□□□□□ -1.65
HOXA1P49639 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.73□□□□□ -1.65
HOXA1P49639 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXA1P49639 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HOXA1P49639 AC011492.1-201ENST00000600023 315 ntBASIC4.73□□□□□ -1.65
HOXA1P49639 AC079880.2-201ENST00000603790 1213 ntBASIC4.73□□□□□ -1.65
HOXA1P49639 AL353600.1-201ENST00000608148 251 ntBASIC4.73□□□□□ -1.65
HOXA1P49639 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXA1P49639 AC006946.3-201ENST00000609791 756 ntBASIC4.73□□□□□ -1.65
HOXA1P49639 AC096861.1-201ENST00000616652 240 ntBASIC4.73□□□□□ -1.65
HOXA1P49639 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXA1P49639 AC006840.1-201ENST00000623069 542 ntBASIC4.73□□□□□ -1.65
HOXA1P49639 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXA1P49639 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HOXA1P49639 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HOXA1P49639 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.73□□□□□ -1.65
HOXA1P49639 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXA1P49639 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXA1P49639 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXA1P49639 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HOXA1P49639 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXA1P49639 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HOXA1P49639 AL034549.2-201ENST00000618285 3373 ntBASIC4.73□□□□□ -1.65
HOXA1P49639 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXA1P49639 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXA1P49639 FBXL21-201ENST00000297158 1305 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA1P49639 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
HOXA1P49639 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA1P49639 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
HOXA1P49639 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
HOXA1P49639 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA1P49639 AC007938.2-201ENST00000604666 2634 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
HOXA1P49639 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
HOXA1P49639 AL592182.3-201ENST00000642132 3304 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HOXA1P49639 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HOXA1P49639 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HOXA1P49639 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA1P49639 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA1P49639 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HOXA1P49639 AL139805.1-201ENST00000407837 289 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA1P49639 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXA1P49639 MTCYBP7-201ENST00000419540 1134 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXA1P49639 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXA1P49639 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA1P49639 NANOGP4-201ENST00000427230 913 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXA1P49639 AC006994.1-201ENST00000438212 839 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 Z84478.1-201ENST00000438230 1219 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXA1P49639 FTLP8-201ENST00000446770 267 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 MEMO1P4-201ENST00000453590 386 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 AC104164.3-201ENST00000467363 1258 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 RPL21P18-201ENST00000469899 480 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 H3F3AP5-201ENST00000475267 429 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXA1P49639 LARP7P4-201ENST00000481075 878 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 RPL12P30-201ENST00000488389 499 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 AP002453.1-201ENST00000492327 668 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 SUMO1P1-201ENST00000497904 306 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 AC008629.2-201ENST00000503783 483 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 UBE2V1P12-201ENST00000503954 474 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 AC118282.1-201ENST00000506408 765 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 AC096571.1-202ENST00000506634 735 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 AC113430.1-201ENST00000506872 718 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXA1P49639 MIR2117-201ENST00000516780 80 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXA1P49639 OR4A41P-201ENST00000533053 928 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXA1P49639 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 AC091078.2-201ENST00000557145 559 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXA1P49639 GARSP1-201ENST00000570895 719 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA1P49639 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC4.72□□□□□ -1.65
HOXA1P49639 RN7SL435P-201ENST00000584418 282 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms