Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CSNK1A1P48729 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CSNK1A1P48729 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
CSNK1A1P48729 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
CSNK1A1P48729 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CSNK1A1P48729 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CSNK1A1P48729 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.69□□□□□ -1.66
CSNK1A1P48729 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.69□□□□□ -1.66
CSNK1A1P48729 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CSNK1A1P48729 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CSNK1A1P48729 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.68□□□□□ -1.66
CSNK1A1P48729 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CSNK1A1P48729 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CSNK1A1P48729 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CSNK1A1P48729 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CSNK1A1P48729 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CSNK1A1P48729 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CSNK1A1P48729 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.68□□□□□ -1.66
CSNK1A1P48729 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CSNK1A1P48729 RNA5SP223-201ENST00000365174 120 ntBASIC4.68□□□□□ -1.66
CSNK1A1P48729 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.68□□□□□ -1.66
CSNK1A1P48729 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CSNK1A1P48729 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CSNK1A1P48729 SNORA67-201ENST00000384423 137 ntBASIC4.68□□□□□ -1.66
CSNK1A1P48729 U3.25-201ENST00000391209 220 ntBASIC4.68□□□□□ -1.66
CSNK1A1P48729 AL512422.1-201ENST00000407033 553 ntBASIC4.68□□□□□ -1.66
CSNK1A1P48729 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.68□□□□□ -1.66
CSNK1A1P48729 HSPD1P12-201ENST00000429127 1069 ntBASIC4.68□□□□□ -1.66
CSNK1A1P48729 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.68□□□□□ -1.66
CSNK1A1P48729 AL161722.2-201ENST00000434731 981 ntBASIC4.68□□□□□ -1.66
CSNK1A1P48729 CLUHP1-201ENST00000435012 1190 ntBASIC4.68□□□□□ -1.66
CSNK1A1P48729 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.68□□□□□ -1.66
CSNK1A1P48729 AP002371.1-201ENST00000463604 433 ntBASIC4.68□□□□□ -1.66
CSNK1A1P48729 RN7SL189P-201ENST00000468631 289 ntBASIC4.68□□□□□ -1.66
CSNK1A1P48729 AC016687.1-201ENST00000482574 353 ntBASIC4.68□□□□□ -1.66
CSNK1A1P48729 OR9N1P-201ENST00000491296 333 ntBASIC4.68□□□□□ -1.66
CSNK1A1P48729 RN7SL101P-201ENST00000496350 279 ntBASIC4.68□□□□□ -1.66
CSNK1A1P48729 USP9YP2-201ENST00000504503 1000 ntBASIC4.68□□□□□ -1.66
CSNK1A1P48729 AC106872.4-201ENST00000510050 523 ntBASIC4.68□□□□□ -1.66
CSNK1A1P48729 USP9YP1-201ENST00000513521 1002 ntBASIC4.68□□□□□ -1.66
CSNK1A1P48729 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.68□□□□□ -1.66
CSNK1A1P48729 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.68□□□□□ -1.66
CSNK1A1P48729 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.68□□□□□ -1.66
CSNK1A1P48729 AC106730.2-201ENST00000566641 540 ntBASIC4.68□□□□□ -1.66
CSNK1A1P48729 RN7SL708P-201ENST00000580952 299 ntBASIC4.68□□□□□ -1.66
CSNK1A1P48729 AC026367.3-201ENST00000619032 590 ntBASIC4.68□□□□□ -1.66
CSNK1A1P48729 MIR6839-201ENST00000620425 113 ntBASIC4.68□□□□□ -1.66
CSNK1A1P48729 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.68□□□□□ -1.66
CSNK1A1P48729 CYP4F35P-202ENST00000636121 390 ntBASIC4.68□□□□□ -1.66
CSNK1A1P48729 MIR4302-201ENST00000638058 60 ntBASIC4.68□□□□□ -1.66
CSNK1A1P48729 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.68□□□□□ -1.66
CSNK1A1P48729 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CSNK1A1P48729 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CSNK1A1P48729 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CSNK1A1P48729 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.68□□□□□ -1.66
CSNK1A1P48729 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CSNK1A1P48729 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CSNK1A1P48729 OR55B1P-203ENST00000641518 2602 ntBASIC4.68□□□□□ -1.66
CSNK1A1P48729 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CSNK1A1P48729 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CSNK1A1P48729 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CSNK1A1P48729 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CSNK1A1P48729 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CSNK1A1P48729 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CSNK1A1P48729 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.67□□□□□ -1.66
CSNK1A1P48729 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CSNK1A1P48729 AL450345.1-202ENST00000605741 3881 ntBASIC4.67□□□□□ -1.66
CSNK1A1P48729 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.67□□□□□ -1.66
CSNK1A1P48729 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CSNK1A1P48729 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.67□□□□□ -1.66
CSNK1A1P48729 AC093775.1-201ENST00000624154 1868 ntBASIC4.67□□□□□ -1.66
CSNK1A1P48729 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
CSNK1A1P48729 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CSNK1A1P48729 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
CSNK1A1P48729 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.67□□□□□ -1.66
CSNK1A1P48729 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CSNK1A1P48729 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
CSNK1A1P48729 RLIMP2-201ENST00000427891 1563 ntBASIC4.67□□□□□ -1.66
CSNK1A1P48729 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CSNK1A1P48729 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CSNK1A1P48729 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CSNK1A1P48729 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.67□□□□□ -1.66
CSNK1A1P48729 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CSNK1A1P48729 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CSNK1A1P48729 RN7SKP160-201ENST00000363804 340 ntBASIC4.67□□□□□ -1.66
CSNK1A1P48729 MIR589-201ENST00000385238 99 ntBASIC4.67□□□□□ -1.66
CSNK1A1P48729 OR8V1P-201ENST00000395193 873 ntBASIC4.67□□□□□ -1.66
CSNK1A1P48729 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.67□□□□□ -1.66
CSNK1A1P48729 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.67□□□□□ -1.66
CSNK1A1P48729 AC244033.1-201ENST00000426826 870 ntBASIC4.67□□□□□ -1.66
CSNK1A1P48729 RPL7L1P9-201ENST00000431298 745 ntBASIC4.67□□□□□ -1.66
CSNK1A1P48729 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.67□□□□□ -1.66
CSNK1A1P48729 AL138787.1-202ENST00000437804 898 ntBASIC4.67□□□□□ -1.66
CSNK1A1P48729 GAPDHP58-201ENST00000438477 1006 ntBASIC4.67□□□□□ -1.66
CSNK1A1P48729 TCEA1P3-201ENST00000443005 880 ntBASIC4.67□□□□□ -1.66
CSNK1A1P48729 VN1R96P-201ENST00000446052 858 ntBASIC4.67□□□□□ -1.66
CSNK1A1P48729 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.67□□□□□ -1.66
CSNK1A1P48729 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.67□□□□□ -1.66
CSNK1A1P48729 AC016724.1-201ENST00000453215 421 ntBASIC4.67□□□□□ -1.66
CSNK1A1P48729 RPS4XP12-201ENST00000461747 709 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms