Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AL359715.4-201ENST00000606629 1436 ntBASIC6.33□□□□□ -1.4
TM4SF4P48230 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TM4SF4P48230 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
TM4SF4P48230 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.33□□□□□ -1.4
TM4SF4P48230 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TM4SF4P48230 AC022819.1-201ENST00000563495 3910 ntBASIC6.32□□□□□ -1.4
TM4SF4P48230 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.32□□□□□ -1.4
TM4SF4P48230 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
TM4SF4P48230 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
TM4SF4P48230 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TM4SF4P48230 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TM4SF4P48230 MTND4P9-201ENST00000507819 1346 ntBASIC6.32□□□□□ -1.4
TM4SF4P48230 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.32□□□□□ -1.4
TM4SF4P48230 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TM4SF4P48230 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TM4SF4P48230 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.32□□□□□ -1.4
TM4SF4P48230 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TM4SF4P48230 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TM4SF4P48230 AC126755.2-208ENST00000327792 462 ntBASIC6.32□□□□□ -1.4
TM4SF4P48230 AC138969.1-213ENST00000331436 462 ntBASIC6.32□□□□□ -1.4
TM4SF4P48230 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
TM4SF4P48230 RNU6-729P-201ENST00000384399 107 ntBASIC6.32□□□□□ -1.4
TM4SF4P48230 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
TM4SF4P48230 LSM5-206ENST00000409987 504 ntTSL 5 BASIC6.32□□□□□ -1.4
TM4SF4P48230 NPM1P40-201ENST00000412758 733 ntBASIC6.32□□□□□ -1.4
TM4SF4P48230 DPPA2P2-201ENST00000418220 897 ntBASIC6.32□□□□□ -1.4
TM4SF4P48230 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.32□□□□□ -1.4
TM4SF4P48230 AC016027.5-201ENST00000427227 210 ntBASIC6.32□□□□□ -1.4
TM4SF4P48230 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.32□□□□□ -1.4
TM4SF4P48230 GSTM5P1-201ENST00000434751 660 ntBASIC6.32□□□□□ -1.4
TM4SF4P48230 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.32□□□□□ -1.4
TM4SF4P48230 AL672138.1-201ENST00000450604 1015 ntBASIC6.32□□□□□ -1.4
TM4SF4P48230 AC092647.2-201ENST00000452998 253 ntBASIC6.32□□□□□ -1.4
TM4SF4P48230 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC6.32□□□□□ -1.4
TM4SF4P48230 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.32□□□□□ -1.4
TM4SF4P48230 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.32□□□□□ -1.4
TM4SF4P48230 AC079080.1-201ENST00000479841 822 ntBASIC6.32□□□□□ -1.4
TM4SF4P48230 AC068587.1-201ENST00000483613 781 ntBASIC6.32□□□□□ -1.4
TM4SF4P48230 NPM1P28-201ENST00000492269 840 ntBASIC6.32□□□□□ -1.4
TM4SF4P48230 HPRT1P1-201ENST00000509498 657 ntBASIC6.32□□□□□ -1.4
TM4SF4P48230 IGHV3-63-201ENST00000518422 341 ntBASIC6.32□□□□□ -1.4
TM4SF4P48230 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
TM4SF4P48230 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC6.32□□□□□ -1.4
TM4SF4P48230 AL049779.3-201ENST00000557141 606 ntBASIC6.32□□□□□ -1.4
TM4SF4P48230 AC023158.1-201ENST00000561632 1025 ntBASIC6.32□□□□□ -1.4
TM4SF4P48230 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.32□□□□□ -1.4
TM4SF4P48230 AC105148.1-201ENST00000604961 409 ntBASIC6.32□□□□□ -1.4
TM4SF4P48230 AC073137.1-201ENST00000605636 634 ntBASIC6.32□□□□□ -1.4
TM4SF4P48230 AC083809.1-201ENST00000615051 472 ntBASIC6.32□□□□□ -1.4
TM4SF4P48230 AL138955.1-201ENST00000622881 1040 ntBASIC6.32□□□□□ -1.4
TM4SF4P48230 AC015660.5-201ENST00000623238 564 ntBASIC6.32□□□□□ -1.4
TM4SF4P48230 AC016717.3-201ENST00000624730 554 ntBASIC6.32□□□□□ -1.4
TM4SF4P48230 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.32□□□□□ -1.4
TM4SF4P48230 AL590396.2-201ENST00000636511 1041 ntBASIC6.32□□□□□ -1.4
TM4SF4P48230 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.32□□□□□ -1.4
TM4SF4P48230 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TM4SF4P48230 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TM4SF4P48230 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.32□□□□□ -1.4
TM4SF4P48230 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TM4SF4P48230 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TM4SF4P48230 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.32□□□□□ -1.4
TM4SF4P48230 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
TM4SF4P48230 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
TM4SF4P48230 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
TM4SF4P48230 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
TM4SF4P48230 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TM4SF4P48230 MT-RNR2-201ENST00000387347 1559 ntBASIC6.31□□□□□ -1.4
TM4SF4P48230 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.31□□□□□ -1.4
TM4SF4P48230 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TM4SF4P48230 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TM4SF4P48230 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TM4SF4P48230 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TM4SF4P48230 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TM4SF4P48230 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
TM4SF4P48230 AL121768.1-201ENST00000613917 2544 ntBASIC6.31□□□□□ -1.4
TM4SF4P48230 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TM4SF4P48230 RN7SKP113-201ENST00000363891 295 ntBASIC6.31□□□□□ -1.4
TM4SF4P48230 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
TM4SF4P48230 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TM4SF4P48230 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TM4SF4P48230 MIR620-201ENST00000385232 95 ntBASIC6.31□□□□□ -1.4
TM4SF4P48230 OR4K12P-201ENST00000406538 961 ntBASIC6.31□□□□□ -1.4
TM4SF4P48230 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TM4SF4P48230 COX6B1P1-201ENST00000415962 213 ntBASIC6.31□□□□□ -1.4
TM4SF4P48230 VN1R21P-201ENST00000426703 765 ntBASIC6.31□□□□□ -1.4
TM4SF4P48230 RPL7P56-201ENST00000429441 717 ntBASIC6.31□□□□□ -1.4
TM4SF4P48230 PRPF38AP2-201ENST00000438179 851 ntBASIC6.31□□□□□ -1.4
TM4SF4P48230 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.31□□□□□ -1.4
TM4SF4P48230 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.31□□□□□ -1.4
TM4SF4P48230 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
TM4SF4P48230 CLIC4P1-201ENST00000453177 535 ntBASIC6.31□□□□□ -1.4
TM4SF4P48230 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.31□□□□□ -1.4
TM4SF4P48230 snoU13.20-201ENST00000459180 104 ntBASIC6.31□□□□□ -1.4
TM4SF4P48230 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.31□□□□□ -1.4
TM4SF4P48230 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC6.31□□□□□ -1.4
TM4SF4P48230 RNA5SP373-201ENST00000517271 95 ntBASIC6.31□□□□□ -1.4
TM4SF4P48230 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC6.31□□□□□ -1.4
TM4SF4P48230 C1GALT1P3-201ENST00000522049 819 ntBASIC6.31□□□□□ -1.4
TM4SF4P48230 AC244502.2-201ENST00000543361 851 ntBASIC6.31□□□□□ -1.4
TM4SF4P48230 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 175.7 ms