Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.7□□□□□ -1.5
SSR1P43307 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.7□□□□□ -1.5
SSR1P43307 BMS1P21-201ENST00000634565 365 ntBASIC5.7□□□□□ -1.5
SSR1P43307 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.7□□□□□ -1.5
SSR1P43307 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SSR1P43307 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SSR1P43307 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSR1P43307 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSR1P43307 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.7□□□□□ -1.5
SSR1P43307 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.7□□□□□ -1.5
SSR1P43307 AC006206.1-201ENST00000544842 3387 ntBASIC5.7□□□□□ -1.5
SSR1P43307 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SSR1P43307 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.7□□□□□ -1.5
SSR1P43307 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SSR1P43307 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SSR1P43307 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SSR1P43307 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.69□□□□□ -1.5
SSR1P43307 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.69□□□□□ -1.5
SSR1P43307 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
SSR1P43307 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SSR1P43307 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SSR1P43307 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSR1P43307 RNA5SP46-201ENST00000362370 120 ntBASIC5.69□□□□□ -1.5
SSR1P43307 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.69□□□□□ -1.5
SSR1P43307 Z93019.1-201ENST00000416450 973 ntBASIC5.69□□□□□ -1.5
SSR1P43307 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.69□□□□□ -1.5
SSR1P43307 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SSR1P43307 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.69□□□□□ -1.5
SSR1P43307 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.69□□□□□ -1.5
SSR1P43307 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.69□□□□□ -1.5
SSR1P43307 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.69□□□□□ -1.5
SSR1P43307 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SSR1P43307 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SSR1P43307 HSPE1P22-201ENST00000456856 327 ntBASIC5.69□□□□□ -1.5
SSR1P43307 PSMA2P2-201ENST00000504319 686 ntBASIC5.69□□□□□ -1.5
SSR1P43307 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.69□□□□□ -1.5
SSR1P43307 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.69□□□□□ -1.5
SSR1P43307 RN7SKP70-201ENST00000516655 271 ntBASIC5.69□□□□□ -1.5
SSR1P43307 SCARNA20.4-201ENST00000516969 131 ntBASIC5.69□□□□□ -1.5
SSR1P43307 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.69□□□□□ -1.5
SSR1P43307 CDC42P3-201ENST00000518493 633 ntBASIC5.69□□□□□ -1.5
SSR1P43307 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SSR1P43307 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.69□□□□□ -1.5
SSR1P43307 HMGB3P26-201ENST00000560051 582 ntBASIC5.69□□□□□ -1.5
SSR1P43307 RN7SL290P-201ENST00000578661 300 ntBASIC5.69□□□□□ -1.5
SSR1P43307 AC090312.1-201ENST00000580637 348 ntBASIC5.69□□□□□ -1.5
SSR1P43307 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.69□□□□□ -1.5
SSR1P43307 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.69□□□□□ -1.5
SSR1P43307 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.69□□□□□ -1.5
SSR1P43307 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.69□□□□□ -1.5
SSR1P43307 AC009027.1-201ENST00000604510 479 ntBASIC5.69□□□□□ -1.5
SSR1P43307 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.69□□□□□ -1.5
SSR1P43307 AL158062.1-201ENST00000619632 745 ntBASIC5.69□□□□□ -1.5
SSR1P43307 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.69□□□□□ -1.5
SSR1P43307 AC073136.1-201ENST00000449426 2884 ntBASIC5.69□□□□□ -1.5
SSR1P43307 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.69□□□□□ -1.5
SSR1P43307 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSR1P43307 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSR1P43307 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.68□□□□□ -1.5
SSR1P43307 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSR1P43307 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSR1P43307 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.68□□□□□ -1.5
SSR1P43307 SNORA16A-201ENST00000384342 137 ntBASIC5.68□□□□□ -1.5
SSR1P43307 RNA5SP122-201ENST00000384457 108 ntBASIC5.68□□□□□ -1.5
SSR1P43307 AL359643.1-201ENST00000404109 423 ntBASIC5.68□□□□□ -1.5
SSR1P43307 AC211486.3-201ENST00000412694 621 ntBASIC5.68□□□□□ -1.5
SSR1P43307 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SSR1P43307 IPMKP1-201ENST00000425988 855 ntBASIC5.68□□□□□ -1.5
SSR1P43307 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.68□□□□□ -1.5
SSR1P43307 AC090018.1-201ENST00000434369 367 ntBASIC5.68□□□□□ -1.5
SSR1P43307 SUMO2P3-201ENST00000438311 288 ntBASIC5.68□□□□□ -1.5
SSR1P43307 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.68□□□□□ -1.5
SSR1P43307 AC019185.1-201ENST00000442718 389 ntBASIC5.68□□□□□ -1.5
SSR1P43307 MTND4LP12-201ENST00000448237 295 ntBASIC5.68□□□□□ -1.5
SSR1P43307 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.68□□□□□ -1.5
SSR1P43307 AC125612.1-201ENST00000547580 377 ntBASIC5.68□□□□□ -1.5
SSR1P43307 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.68□□□□□ -1.5
SSR1P43307 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.68□□□□□ -1.5
SSR1P43307 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SSR1P43307 AC009237.13-201ENST00000603193 276 ntBASIC5.68□□□□□ -1.5
SSR1P43307 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.68□□□□□ -1.5
SSR1P43307 AC132068.1-201ENST00000623805 459 ntBASIC5.68□□□□□ -1.5
SSR1P43307 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.68□□□□□ -1.5
SSR1P43307 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSR1P43307 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSR1P43307 SCN1A-220ENST00000641603 12506 ntBASIC5.68□□□□□ -1.5
SSR1P43307 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SSR1P43307 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.68□□□□□ -1.5
SSR1P43307 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SSR1P43307 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.68□□□□□ -1.5
SSR1P43307 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
SSR1P43307 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.67□□□□□ -1.5
SSR1P43307 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.67□□□□□ -1.5
SSR1P43307 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SSR1P43307 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SSR1P43307 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SSR1P43307 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
SSR1P43307 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SSR1P43307 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SSR1P43307 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms