Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCLP35914 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.21□□□□□ -1.58
HMGCLP35914 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.21□□□□□ -1.58
HMGCLP35914 AC126915.2-201ENST00000610957 190 ntBASIC5.21□□□□□ -1.58
HMGCLP35914 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.21□□□□□ -1.58
HMGCLP35914 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.21□□□□□ -1.58
HMGCLP35914 MIR6826-201ENST00000617808 98 ntBASIC5.21□□□□□ -1.58
HMGCLP35914 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGCLP35914 AC138627.1-204ENST00000641894 765 ntBASIC5.21□□□□□ -1.58
HMGCLP35914 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCLP35914 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCLP35914 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCLP35914 PANDAR-201ENST00000629595 1506 ntBASIC5.21□□□□□ -1.58
HMGCLP35914 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
HMGCLP35914 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCLP35914 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCLP35914 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCLP35914 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
HMGCLP35914 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HMGCLP35914 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.2□□□□□ -1.58
HMGCLP35914 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HMGCLP35914 GVINP1-202ENST00000531871 7271 ntBASIC5.2□□□□□ -1.58
HMGCLP35914 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.2□□□□□ -1.58
HMGCLP35914 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HMGCLP35914 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HMGCLP35914 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HMGCLP35914 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HMGCLP35914 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
HMGCLP35914 RNU1-43P-201ENST00000365052 165 ntBASIC5.2□□□□□ -1.58
HMGCLP35914 RNU6-167P-201ENST00000384292 106 ntBASIC5.2□□□□□ -1.58
HMGCLP35914 MIR600-201ENST00000385007 98 ntBASIC5.2□□□□□ -1.58
HMGCLP35914 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HMGCLP35914 EI24P4-201ENST00000423683 1078 ntBASIC5.2□□□□□ -1.58
HMGCLP35914 NANOGP4-201ENST00000427230 913 ntBASIC5.2□□□□□ -1.58
HMGCLP35914 AC009238.2-201ENST00000431026 355 ntBASIC5.2□□□□□ -1.58
HMGCLP35914 CNOT7P2-201ENST00000441051 832 ntBASIC5.2□□□□□ -1.58
HMGCLP35914 OR52E3P-201ENST00000452083 936 ntBASIC5.2□□□□□ -1.58
HMGCLP35914 AL389915.2-201ENST00000454576 441 ntBASIC5.2□□□□□ -1.58
HMGCLP35914 AC079841.1-201ENST00000481228 950 ntBASIC5.2□□□□□ -1.58
HMGCLP35914 AC072052.1-201ENST00000496556 306 ntBASIC5.2□□□□□ -1.58
HMGCLP35914 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.2□□□□□ -1.58
HMGCLP35914 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.2□□□□□ -1.58
HMGCLP35914 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
HMGCLP35914 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
HMGCLP35914 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HMGCLP35914 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HMGCLP35914 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HMGCLP35914 MIR1269B-201ENST00000580405 75 ntBASIC5.2□□□□□ -1.58
HMGCLP35914 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.2□□□□□ -1.58
HMGCLP35914 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.2□□□□□ -1.58
HMGCLP35914 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.2□□□□□ -1.58
HMGCLP35914 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.2□□□□□ -1.58
HMGCLP35914 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HMGCLP35914 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.2□□□□□ -1.58
HMGCLP35914 ZNF733P-202ENST00000444809 1573 ntBASIC5.2□□□□□ -1.58
HMGCLP35914 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HMGCLP35914 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.2□□□□□ -1.58
HMGCLP35914 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.2□□□□□ -1.58
HMGCLP35914 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
HMGCLP35914 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
HMGCLP35914 TCP1P3-201ENST00000414406 1498 ntBASIC5.2□□□□□ -1.58
HMGCLP35914 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMGCLP35914 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMGCLP35914 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.19□□□□□ -1.58
HMGCLP35914 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMGCLP35914 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMGCLP35914 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HMGCLP35914 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
HMGCLP35914 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMGCLP35914 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HMGCLP35914 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.19□□□□□ -1.58
HMGCLP35914 RNA5SP223-201ENST00000365174 120 ntBASIC5.19□□□□□ -1.58
HMGCLP35914 MIR323B-201ENST00000385269 82 ntBASIC5.19□□□□□ -1.58
HMGCLP35914 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HMGCLP35914 DUTP5-201ENST00000406790 469 ntBASIC5.19□□□□□ -1.58
HMGCLP35914 RANP7-201ENST00000418085 644 ntBASIC5.19□□□□□ -1.58
HMGCLP35914 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.19□□□□□ -1.58
HMGCLP35914 MARK2P12-201ENST00000420129 585 ntBASIC5.19□□□□□ -1.58
HMGCLP35914 AL355433.1-201ENST00000422804 300 ntBASIC5.19□□□□□ -1.58
HMGCLP35914 FAR2P1-206ENST00000449736 709 ntBASIC5.19□□□□□ -1.58
HMGCLP35914 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.19□□□□□ -1.58
HMGCLP35914 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.19□□□□□ -1.58
HMGCLP35914 AC108161.1-201ENST00000461060 402 ntBASIC5.19□□□□□ -1.58
HMGCLP35914 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
HMGCLP35914 AC023424.1-201ENST00000496058 459 ntBASIC5.19□□□□□ -1.58
HMGCLP35914 SNRPCP2-201ENST00000504370 475 ntBASIC5.19□□□□□ -1.58
HMGCLP35914 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.19□□□□□ -1.58
HMGCLP35914 AC097173.1-201ENST00000505862 819 ntBASIC5.19□□□□□ -1.58
HMGCLP35914 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.19□□□□□ -1.58
HMGCLP35914 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.19□□□□□ -1.58
HMGCLP35914 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.19□□□□□ -1.58
HMGCLP35914 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.19□□□□□ -1.58
HMGCLP35914 TRAV11-201ENST00000539512 339 ntBASIC5.19□□□□□ -1.58
HMGCLP35914 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.19□□□□□ -1.58
HMGCLP35914 AC073575.2-201ENST00000614212 627 ntBASIC5.19□□□□□ -1.58
HMGCLP35914 OR8G7P-201ENST00000616658 848 ntBASIC5.19□□□□□ -1.58
HMGCLP35914 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.19□□□□□ -1.58
HMGCLP35914 AC091932.2-201ENST00000623014 291 ntBASIC5.19□□□□□ -1.58
HMGCLP35914 AC015660.5-201ENST00000623238 564 ntBASIC5.19□□□□□ -1.58
HMGCLP35914 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms