Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AC245014.3-201ENST00000618589 347 ntBASIC7.02□□□□□ -1.29
HMGB1P09429 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.02□□□□□ -1.29
HMGB1P09429 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.02□□□□□ -1.29
HMGB1P09429 MIR6806-201ENST00000622141 64 ntBASIC7.02□□□□□ -1.29
HMGB1P09429 BMS1P21-201ENST00000634565 365 ntBASIC7.02□□□□□ -1.29
HMGB1P09429 AC104966.1-201ENST00000467010 1464 ntBASIC7.02□□□□□ -1.29
HMGB1P09429 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HMGB1P09429 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC7.02□□□□□ -1.29
HMGB1P09429 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HMGB1P09429 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC7.02□□□□□ -1.29
HMGB1P09429 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC7.02□□□□□ -1.29
HMGB1P09429 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMGB1P09429 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC7.01□□□□□ -1.29
HMGB1P09429 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC7.01□□□□□ -1.29
HMGB1P09429 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMGB1P09429 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC7.01□□□□□ -1.29
HMGB1P09429 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC7.01□□□□□ -1.29
HMGB1P09429 AC020656.2-201ENST00000613291 5309 ntBASIC7.01□□□□□ -1.29
HMGB1P09429 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMGB1P09429 ENSAP3-201ENST00000312710 333 ntBASIC7.01□□□□□ -1.29
HMGB1P09429 SELENOWP1-201ENST00000322792 252 ntBASIC7.01□□□□□ -1.29
HMGB1P09429 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC7.01□□□□□ -1.29
HMGB1P09429 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMGB1P09429 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
HMGB1P09429 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HMGB1P09429 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
HMGB1P09429 DNAJA1P3-201ENST00000399417 1194 ntBASIC7.01□□□□□ -1.29
HMGB1P09429 AC016739.1-201ENST00000405359 345 ntBASIC7.01□□□□□ -1.29
HMGB1P09429 AC092651.1-201ENST00000426110 312 ntBASIC7.01□□□□□ -1.29
HMGB1P09429 TUBB4BP6-201ENST00000437576 479 ntBASIC7.01□□□□□ -1.29
HMGB1P09429 KRT8P51-201ENST00000438938 274 ntBASIC7.01□□□□□ -1.29
HMGB1P09429 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.01□□□□□ -1.29
HMGB1P09429 AC005165.2-201ENST00000466070 380 ntBASIC7.01□□□□□ -1.29
HMGB1P09429 RPL38P3-201ENST00000484463 213 ntBASIC7.01□□□□□ -1.29
HMGB1P09429 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.01□□□□□ -1.29
HMGB1P09429 AL158068.1-201ENST00000506116 616 ntBASIC7.01□□□□□ -1.29
HMGB1P09429 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC7.01□□□□□ -1.29
HMGB1P09429 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC7.01□□□□□ -1.29
HMGB1P09429 AC060775.1-201ENST00000518241 520 ntBASIC7.01□□□□□ -1.29
HMGB1P09429 IGKV3D-25-201ENST00000519599 235 ntBASIC7.01□□□□□ -1.29
HMGB1P09429 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC7.01□□□□□ -1.29
HMGB1P09429 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC7.01□□□□□ -1.29
HMGB1P09429 AC083923.1-201ENST00000523708 376 ntBASIC7.01□□□□□ -1.29
HMGB1P09429 C1DP5-201ENST00000525775 383 ntBASIC7.01□□□□□ -1.29
HMGB1P09429 OR4A2P-201ENST00000527276 913 ntBASIC7.01□□□□□ -1.29
HMGB1P09429 AP003396.4-201ENST00000527574 265 ntBASIC7.01□□□□□ -1.29
HMGB1P09429 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC7.01□□□□□ -1.29
HMGB1P09429 AC024405.1-201ENST00000532521 1042 ntBASIC7.01□□□□□ -1.29
HMGB1P09429 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.01□□□□□ -1.29
HMGB1P09429 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC7.01□□□□□ -1.29
HMGB1P09429 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.01□□□□□ -1.29
HMGB1P09429 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC7.01□□□□□ -1.29
HMGB1P09429 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC7.01□□□□□ -1.29
HMGB1P09429 AC026826.3-201ENST00000561747 158 ntBASIC7.01□□□□□ -1.29
HMGB1P09429 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC7.01□□□□□ -1.29
HMGB1P09429 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC7.01□□□□□ -1.29
HMGB1P09429 AC145423.1-201ENST00000605712 336 ntBASIC7.01□□□□□ -1.29
HMGB1P09429 OR2BH1P-201ENST00000608850 864 ntBASIC7.01□□□□□ -1.29
HMGB1P09429 AC048341.3-201ENST00000619323 491 ntBASIC7.01□□□□□ -1.29
HMGB1P09429 AC096708.4-201ENST00000620563 552 ntBASIC7.01□□□□□ -1.29
HMGB1P09429 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC7.01□□□□□ -1.29
HMGB1P09429 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC7.01□□□□□ -1.29
HMGB1P09429 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC7.01□□□□□ -1.29
HMGB1P09429 DCN-218ENST00000551354 2924 ntTSL 3 BASIC7.01□□□□□ -1.29
HMGB1P09429 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMGB1P09429 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMGB1P09429 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HMGB1P09429 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMGB1P09429 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
HMGB1P09429 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
HMGB1P09429 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
HMGB1P09429 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
HMGB1P09429 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC7□□□□□ -1.29
HMGB1P09429 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC7□□□□□ -1.29
HMGB1P09429 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HMGB1P09429 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC7□□□□□ -1.29
HMGB1P09429 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7□□□□□ -1.29
HMGB1P09429 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC7□□□□□ -1.29
HMGB1P09429 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC7□□□□□ -1.29
HMGB1P09429 SNORD56.4-201ENST00000363883 71 ntBASIC7□□□□□ -1.29
HMGB1P09429 MIR130B-202ENST00000385018 82 ntBASIC7□□□□□ -1.29
HMGB1P09429 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HMGB1P09429 MIR1275-201ENST00000408770 80 ntBASIC7□□□□□ -1.29
HMGB1P09429 MTCO2P1-201ENST00000424648 477 ntBASIC7□□□□□ -1.29
HMGB1P09429 PLA2G12AP2-201ENST00000424744 264 ntBASIC7□□□□□ -1.29
HMGB1P09429 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC7□□□□□ -1.29
HMGB1P09429 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC7□□□□□ -1.29
HMGB1P09429 AC096775.1-201ENST00000437724 448 ntBASIC7□□□□□ -1.29
HMGB1P09429 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC7□□□□□ -1.29
HMGB1P09429 HMGB3P9-201ENST00000441799 583 ntBASIC7□□□□□ -1.29
HMGB1P09429 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC7□□□□□ -1.29
HMGB1P09429 GEMIN2P1-201ENST00000454246 752 ntBASIC7□□□□□ -1.29
HMGB1P09429 AC118758.1-202ENST00000454719 225 ntBASIC7□□□□□ -1.29
HMGB1P09429 AC108751.3-201ENST00000461814 1020 ntBASIC7□□□□□ -1.29
HMGB1P09429 AC098847.1-201ENST00000473094 348 ntBASIC7□□□□□ -1.29
HMGB1P09429 RPL21P47-201ENST00000483696 477 ntBASIC7□□□□□ -1.29
HMGB1P09429 FTH1P24-201ENST00000503502 462 ntBASIC7□□□□□ -1.29
HMGB1P09429 RN7SKP183-201ENST00000517169 324 ntBASIC7□□□□□ -1.29
HMGB1P09429 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC7□□□□□ -1.29
HMGB1P09429 AC084121.1-201ENST00000533882 835 ntBASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms