Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.82□□□□□ -1.48
RB1P06400 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.82□□□□□ -1.48
RB1P06400 HPVC1-201ENST00000629899 1198 ntBASIC5.82□□□□□ -1.48
RB1P06400 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RB1P06400 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RB1P06400 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RB1P06400 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RB1P06400 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RB1P06400 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.82□□□□□ -1.48
RB1P06400 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RB1P06400 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.82□□□□□ -1.48
RB1P06400 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
RB1P06400 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.82□□□□□ -1.48
RB1P06400 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RB1P06400 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RB1P06400 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
RB1P06400 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.82□□□□□ -1.48
RB1P06400 MTND5P23-201ENST00000430812 1655 ntBASIC5.82□□□□□ -1.48
RB1P06400 SAMM50P1-201ENST00000455403 1399 ntBASIC5.81□□□□□ -1.48
RB1P06400 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.81□□□□□ -1.48
RB1P06400 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
RB1P06400 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
RB1P06400 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
RB1P06400 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.81□□□□□ -1.48
RB1P06400 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RB1P06400 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.81□□□□□ -1.48
RB1P06400 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
RB1P06400 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RB1P06400 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
RB1P06400 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.81□□□□□ -1.48
RB1P06400 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
RB1P06400 RNA5SP91-201ENST00000390902 119 ntBASIC5.81□□□□□ -1.48
RB1P06400 NPM1P37-201ENST00000403105 874 ntBASIC5.81□□□□□ -1.48
RB1P06400 RNU2-22P-201ENST00000411266 212 ntBASIC5.81□□□□□ -1.48
RB1P06400 CR848007.2-201ENST00000424918 787 ntBASIC5.81□□□□□ -1.48
RB1P06400 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.81□□□□□ -1.48
RB1P06400 MRPS33P4-201ENST00000434892 317 ntBASIC5.81□□□□□ -1.48
RB1P06400 RPS3AP41-201ENST00000462701 778 ntBASIC5.81□□□□□ -1.48
RB1P06400 AC006463.2-201ENST00000473326 348 ntBASIC5.81□□□□□ -1.48
RB1P06400 STRADBP1-201ENST00000478954 1281 ntBASIC5.81□□□□□ -1.48
RB1P06400 ATP5LP5-201ENST00000483050 299 ntBASIC5.81□□□□□ -1.48
RB1P06400 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.81□□□□□ -1.48
RB1P06400 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.81□□□□□ -1.48
RB1P06400 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.81□□□□□ -1.48
RB1P06400 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.81□□□□□ -1.48
RB1P06400 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.81□□□□□ -1.48
RB1P06400 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.81□□□□□ -1.48
RB1P06400 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.81□□□□□ -1.48
RB1P06400 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RB1P06400 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RB1P06400 AC127381.1-201ENST00000555979 939 ntBASIC5.81□□□□□ -1.48
RB1P06400 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.81□□□□□ -1.48
RB1P06400 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC5.81□□□□□ -1.48
RB1P06400 ELOCP28-201ENST00000590044 317 ntBASIC5.81□□□□□ -1.48
RB1P06400 AL513327.3-201ENST00000602618 469 ntBASIC5.81□□□□□ -1.48
RB1P06400 HMGB1P51-201ENST00000605166 638 ntBASIC5.81□□□□□ -1.48
RB1P06400 AL159169.2-201ENST00000610061 1269 ntBASIC5.81□□□□□ -1.48
RB1P06400 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.81□□□□□ -1.48
RB1P06400 MIR6810-201ENST00000622701 70 ntBASIC5.81□□□□□ -1.48
RB1P06400 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.81□□□□□ -1.48
RB1P06400 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.81□□□□□ -1.48
RB1P06400 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RB1P06400 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.81□□□□□ -1.48
RB1P06400 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RB1P06400 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
RB1P06400 AL356317.1-201ENST00000396110 1436 ntBASIC5.81□□□□□ -1.48
RB1P06400 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RB1P06400 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RB1P06400 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RB1P06400 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RB1P06400 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
RB1P06400 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RB1P06400 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.8□□□□□ -1.48
RB1P06400 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RB1P06400 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.8□□□□□ -1.48
RB1P06400 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
RB1P06400 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RB1P06400 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.8□□□□□ -1.48
RB1P06400 RNU6-883P-201ENST00000384597 107 ntBASIC5.8□□□□□ -1.48
RB1P06400 ST13P16-201ENST00000401760 781 ntBASIC5.8□□□□□ -1.48
RB1P06400 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.8□□□□□ -1.48
RB1P06400 AC104837.2-201ENST00000427236 424 ntBASIC5.8□□□□□ -1.48
RB1P06400 TMEM183AP1-205ENST00000432739 290 ntBASIC5.8□□□□□ -1.48
RB1P06400 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.8□□□□□ -1.48
RB1P06400 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.8□□□□□ -1.48
RB1P06400 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.8□□□□□ -1.48
RB1P06400 RPL31P44-201ENST00000447680 377 ntBASIC5.8□□□□□ -1.48
RB1P06400 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.8□□□□□ -1.48
RB1P06400 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.8□□□□□ -1.48
RB1P06400 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.8□□□□□ -1.48
RB1P06400 OR10D4P-201ENST00000525892 951 ntBASIC5.8□□□□□ -1.48
RB1P06400 GSTP1P1-201ENST00000548078 319 ntBASIC5.8□□□□□ -1.48
RB1P06400 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
RB1P06400 AC005520.3-201ENST00000602874 370 ntBASIC5.8□□□□□ -1.48
RB1P06400 HIRAP1-201ENST00000605318 787 ntBASIC5.8□□□□□ -1.48
RB1P06400 AL133481.2-203ENST00000607558 139 ntBASIC5.8□□□□□ -1.48
RB1P06400 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RB1P06400 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.8□□□□□ -1.48
RB1P06400 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
RB1P06400 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms