Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RN7SL547P-201ENST00000490793 290 ntBASIC4.63□□□□□ -1.67
HLA-DPB1P04440 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.63□□□□□ -1.67
HLA-DPB1P04440 HMGB1P44-201ENST00000508597 572 ntBASIC4.63□□□□□ -1.67
HLA-DPB1P04440 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.63□□□□□ -1.67
HLA-DPB1P04440 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DPB1P04440 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DPB1P04440 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.63□□□□□ -1.67
HLA-DPB1P04440 GTF2IP11-201ENST00000526931 420 ntBASIC4.63□□□□□ -1.67
HLA-DPB1P04440 AP004607.2-201ENST00000533949 322 ntBASIC4.63□□□□□ -1.67
HLA-DPB1P04440 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.63□□□□□ -1.67
HLA-DPB1P04440 AGGF1P9-201ENST00000561884 913 ntBASIC4.63□□□□□ -1.67
HLA-DPB1P04440 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DPB1P04440 AC012146.2-201ENST00000576545 416 ntBASIC4.63□□□□□ -1.67
HLA-DPB1P04440 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DPB1P04440 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DPB1P04440 AC108359.1-201ENST00000616451 1211 ntBASIC4.63□□□□□ -1.67
HLA-DPB1P04440 MIR8069-1-201ENST00000616627 86 ntBASIC4.63□□□□□ -1.67
HLA-DPB1P04440 MIR8069-2-201ENST00000621412 86 ntBASIC4.63□□□□□ -1.67
HLA-DPB1P04440 MIR8080-201ENST00000622224 89 ntBASIC4.63□□□□□ -1.67
HLA-DPB1P04440 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.63□□□□□ -1.67
HLA-DPB1P04440 AL049767.1-202ENST00000637826 242 ntBASIC4.63□□□□□ -1.67
HLA-DPB1P04440 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
HLA-DPB1P04440 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.63□□□□□ -1.67
HLA-DPB1P04440 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DPB1P04440 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.63□□□□□ -1.67
HLA-DPB1P04440 AC120036.2-201ENST00000509729 1474 ntBASIC4.62□□□□□ -1.67
HLA-DPB1P04440 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 AC107068.1-201ENST00000563286 4218 ntBASIC4.62□□□□□ -1.67
HLA-DPB1P04440 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 RNA5SP435-201ENST00000364044 108 ntBASIC4.62□□□□□ -1.67
HLA-DPB1P04440 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 AL391422.1-201ENST00000402155 436 ntBASIC4.62□□□□□ -1.67
HLA-DPB1P04440 AL035079.1-201ENST00000405210 287 ntBASIC4.62□□□□□ -1.67
HLA-DPB1P04440 AL390316.1-201ENST00000406279 553 ntBASIC4.62□□□□□ -1.67
HLA-DPB1P04440 AL512422.1-201ENST00000407033 553 ntBASIC4.62□□□□□ -1.67
HLA-DPB1P04440 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 SRSF1P1-201ENST00000424058 520 ntBASIC4.62□□□□□ -1.67
HLA-DPB1P04440 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.62□□□□□ -1.67
HLA-DPB1P04440 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 AC016724.1-201ENST00000453215 421 ntBASIC4.62□□□□□ -1.67
HLA-DPB1P04440 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 CYCSP34-201ENST00000458172 304 ntBASIC4.62□□□□□ -1.67
HLA-DPB1P04440 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 RN7SL423P-201ENST00000486202 304 ntBASIC4.62□□□□□ -1.67
HLA-DPB1P04440 RN7SL184P-201ENST00000488308 297 ntBASIC4.62□□□□□ -1.67
HLA-DPB1P04440 RN7SL101P-201ENST00000496350 279 ntBASIC4.62□□□□□ -1.67
HLA-DPB1P04440 AL136038.1-201ENST00000497246 351 ntBASIC4.62□□□□□ -1.67
HLA-DPB1P04440 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 SUGT1P3-202ENST00000604259 383 ntBASIC4.62□□□□□ -1.67
HLA-DPB1P04440 AL137246.1-201ENST00000607072 977 ntBASIC4.62□□□□□ -1.67
HLA-DPB1P04440 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 AC005840.5-201ENST00000619166 599 ntBASIC4.62□□□□□ -1.67
HLA-DPB1P04440 AP003072.5-201ENST00000623872 773 ntBASIC4.62□□□□□ -1.67
HLA-DPB1P04440 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 AC126323.6-202ENST00000568092 3511 ntBASIC4.62□□□□□ -1.67
HLA-DPB1P04440 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DPB1P04440 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DPB1P04440 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DPB1P04440 AC097063.1-201ENST00000426714 1797 ntBASIC4.61□□□□□ -1.67
HLA-DPB1P04440 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DPB1P04440 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DPB1P04440 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DPB1P04440 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DPB1P04440 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DPB1P04440 RNU1-74P-201ENST00000384108 171 ntBASIC4.61□□□□□ -1.67
HLA-DPB1P04440 OR4K12P-201ENST00000406538 961 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms