Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.97□□□□□ -1.45
COL2A1P02458 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.97□□□□□ -1.45
COL2A1P02458 MIR6780A-201ENST00000615089 68 ntBASIC5.97□□□□□ -1.45
COL2A1P02458 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.97□□□□□ -1.45
COL2A1P02458 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.97□□□□□ -1.45
COL2A1P02458 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL2A1P02458 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC5.97□□□□□ -1.45
COL2A1P02458 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.97□□□□□ -1.45
COL2A1P02458 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL2A1P02458 AC007998.4-201ENST00000612496 2533 ntBASIC5.97□□□□□ -1.45
COL2A1P02458 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
COL2A1P02458 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL2A1P02458 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL2A1P02458 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.97□□□□□ -1.45
COL2A1P02458 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL2A1P02458 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL2A1P02458 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.97□□□□□ -1.45
COL2A1P02458 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.96□□□□□ -1.45
COL2A1P02458 GAPDHP15-201ENST00000398586 975 ntBASIC5.96□□□□□ -1.45
COL2A1P02458 AL021331.1-201ENST00000402817 582 ntBASIC5.96□□□□□ -1.45
COL2A1P02458 AL136116.2-201ENST00000404020 785 ntBASIC5.96□□□□□ -1.45
COL2A1P02458 GTF2IP5-201ENST00000414608 731 ntBASIC5.96□□□□□ -1.45
COL2A1P02458 AC092570.3-201ENST00000420113 693 ntBASIC5.96□□□□□ -1.45
COL2A1P02458 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.96□□□□□ -1.45
COL2A1P02458 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.96□□□□□ -1.45
COL2A1P02458 AC073264.2-201ENST00000448886 166 ntBASIC5.96□□□□□ -1.45
COL2A1P02458 CYCSP42-201ENST00000450823 238 ntBASIC5.96□□□□□ -1.45
COL2A1P02458 NDUFA12P1-201ENST00000455914 406 ntBASIC5.96□□□□□ -1.45
COL2A1P02458 AC090058.1-201ENST00000498788 435 ntBASIC5.96□□□□□ -1.45
COL2A1P02458 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.96□□□□□ -1.45
COL2A1P02458 AC098976.1-201ENST00000513014 541 ntBASIC5.96□□□□□ -1.45
COL2A1P02458 AC034205.1-201ENST00000520621 638 ntBASIC5.96□□□□□ -1.45
COL2A1P02458 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.96□□□□□ -1.45
COL2A1P02458 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.96□□□□□ -1.45
COL2A1P02458 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.96□□□□□ -1.45
COL2A1P02458 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.96□□□□□ -1.45
COL2A1P02458 EIF1P5-201ENST00000585002 234 ntBASIC5.96□□□□□ -1.45
COL2A1P02458 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.96□□□□□ -1.45
COL2A1P02458 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.96□□□□□ -1.45
COL2A1P02458 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
COL2A1P02458 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.96□□□□□ -1.45
COL2A1P02458 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
COL2A1P02458 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
COL2A1P02458 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
COL2A1P02458 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
COL2A1P02458 MSL3P1-202ENST00000440028 1468 ntBASIC5.96□□□□□ -1.45
COL2A1P02458 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL2A1P02458 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL2A1P02458 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL2A1P02458 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL2A1P02458 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
COL2A1P02458 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
COL2A1P02458 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
COL2A1P02458 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.96□□□□□ -1.46
COL2A1P02458 AC079741.1-201ENST00000321498 212 ntBASIC5.96□□□□□ -1.46
COL2A1P02458 AC063943.1-201ENST00000465434 453 ntBASIC5.96□□□□□ -1.46
COL2A1P02458 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.96□□□□□ -1.46
COL2A1P02458 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.96□□□□□ -1.46
COL2A1P02458 OR7H2P-201ENST00000513483 306 ntBASIC5.96□□□□□ -1.46
COL2A1P02458 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.96□□□□□ -1.46
COL2A1P02458 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL2A1P02458 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.96□□□□□ -1.46
COL2A1P02458 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.96□□□□□ -1.46
COL2A1P02458 RN7SL690P-201ENST00000582087 240 ntBASIC5.96□□□□□ -1.46
COL2A1P02458 AL512782.1-201ENST00000603093 364 ntBASIC5.96□□□□□ -1.46
COL2A1P02458 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.96□□□□□ -1.46
COL2A1P02458 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.96□□□□□ -1.46
COL2A1P02458 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL2A1P02458 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL2A1P02458 AP000547.3-204ENST00000588548 2523 ntBASIC5.95□□□□□ -1.46
COL2A1P02458 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.95□□□□□ -1.46
COL2A1P02458 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL2A1P02458 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL2A1P02458 AC004158.1-201ENST00000564508 4319 ntBASIC5.95□□□□□ -1.46
COL2A1P02458 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.95□□□□□ -1.46
COL2A1P02458 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL2A1P02458 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL2A1P02458 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL2A1P02458 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL2A1P02458 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL2A1P02458 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
COL2A1P02458 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.95□□□□□ -1.46
COL2A1P02458 AL390316.1-201ENST00000406279 553 ntBASIC5.95□□□□□ -1.46
COL2A1P02458 RPL18P10-201ENST00000425606 538 ntBASIC5.95□□□□□ -1.46
COL2A1P02458 RPL36AP15-201ENST00000444514 266 ntBASIC5.95□□□□□ -1.46
COL2A1P02458 AC239367.2-201ENST00000447309 705 ntBASIC5.95□□□□□ -1.46
COL2A1P02458 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.95□□□□□ -1.46
COL2A1P02458 OR52J1P-201ENST00000450596 932 ntBASIC5.95□□□□□ -1.46
COL2A1P02458 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.95□□□□□ -1.46
COL2A1P02458 RPL7AP28-201ENST00000464513 571 ntBASIC5.95□□□□□ -1.46
COL2A1P02458 AC026979.1-201ENST00000492525 396 ntBASIC5.95□□□□□ -1.46
COL2A1P02458 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.95□□□□□ -1.46
COL2A1P02458 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.95□□□□□ -1.46
COL2A1P02458 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.95□□□□□ -1.46
COL2A1P02458 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.95□□□□□ -1.46
COL2A1P02458 MTCYBP13-201ENST00000578634 1093 ntBASIC5.95□□□□□ -1.46
COL2A1P02458 MIR1254-2-201ENST00000579553 63 ntBASIC5.95□□□□□ -1.46
COL2A1P02458 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.95□□□□□ -1.46
COL2A1P02458 AP001521.2-201ENST00000608772 546 ntBASIC5.95□□□□□ -1.46
COL2A1P02458 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms