Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS4BO75351 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.85□□□□□ -1.47
VPS4BO75351 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS4BO75351 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VPS4BO75351 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.85□□□□□ -1.47
VPS4BO75351 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.85□□□□□ -1.47
VPS4BO75351 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.85□□□□□ -1.47
VPS4BO75351 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS4BO75351 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS4BO75351 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS4BO75351 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.85□□□□□ -1.47
VPS4BO75351 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
VPS4BO75351 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
VPS4BO75351 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS4BO75351 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
VPS4BO75351 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VPS4BO75351 AC116158.1-201ENST00000560231 2129 ntBASIC5.84□□□□□ -1.47
VPS4BO75351 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.84□□□□□ -1.47
VPS4BO75351 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.84□□□□□ -1.47
VPS4BO75351 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VPS4BO75351 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
VPS4BO75351 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS4BO75351 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS4BO75351 RNU6-906P-201ENST00000384700 70 ntBASIC5.84□□□□□ -1.47
VPS4BO75351 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS4BO75351 MTND4P13-201ENST00000402078 1023 ntBASIC5.84□□□□□ -1.47
VPS4BO75351 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS4BO75351 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
VPS4BO75351 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.84□□□□□ -1.47
VPS4BO75351 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.84□□□□□ -1.47
VPS4BO75351 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.84□□□□□ -1.47
VPS4BO75351 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS4BO75351 RPL22P18-201ENST00000417197 377 ntBASIC5.84□□□□□ -1.47
VPS4BO75351 RPS7P8-201ENST00000418311 581 ntBASIC5.84□□□□□ -1.47
VPS4BO75351 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS4BO75351 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VPS4BO75351 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS4BO75351 AC092648.1-201ENST00000425870 423 ntBASIC5.84□□□□□ -1.47
VPS4BO75351 MTND6P12-201ENST00000428247 522 ntBASIC5.84□□□□□ -1.47
VPS4BO75351 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS4BO75351 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.84□□□□□ -1.47
VPS4BO75351 TUBB4BP6-201ENST00000437576 479 ntBASIC5.84□□□□□ -1.47
VPS4BO75351 AL512593.1-201ENST00000444758 779 ntBASIC5.84□□□□□ -1.47
VPS4BO75351 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
VPS4BO75351 CYCSP42-201ENST00000450823 238 ntBASIC5.84□□□□□ -1.47
VPS4BO75351 Z95152.1-201ENST00000453556 656 ntBASIC5.84□□□□□ -1.47
VPS4BO75351 AL133351.3-201ENST00000454998 193 ntBASIC5.84□□□□□ -1.47
VPS4BO75351 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS4BO75351 CST12P-201ENST00000457644 362 ntBASIC5.84□□□□□ -1.47
VPS4BO75351 AC012123.2-201ENST00000485809 248 ntBASIC5.84□□□□□ -1.47
VPS4BO75351 AC113420.1-201ENST00000507903 571 ntBASIC5.84□□□□□ -1.47
VPS4BO75351 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.84□□□□□ -1.47
VPS4BO75351 AC095052.1-201ENST00000509955 863 ntBASIC5.84□□□□□ -1.47
VPS4BO75351 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VPS4BO75351 RN7SKP288-201ENST00000516227 268 ntBASIC5.84□□□□□ -1.47
VPS4BO75351 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.84□□□□□ -1.47
VPS4BO75351 OR10V3P-201ENST00000525712 725 ntBASIC5.84□□□□□ -1.47
VPS4BO75351 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS4BO75351 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.84□□□□□ -1.47
VPS4BO75351 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.84□□□□□ -1.47
VPS4BO75351 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS4BO75351 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS4BO75351 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.84□□□□□ -1.47
VPS4BO75351 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.84□□□□□ -1.47
VPS4BO75351 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS4BO75351 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS4BO75351 AC113368.1-201ENST00000603736 382 ntBASIC5.84□□□□□ -1.47
VPS4BO75351 SUMO2P14-201ENST00000604488 293 ntBASIC5.84□□□□□ -1.47
VPS4BO75351 AC073387.2-201ENST00000604797 784 ntBASIC5.84□□□□□ -1.47
VPS4BO75351 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VPS4BO75351 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.84□□□□□ -1.47
VPS4BO75351 AC093783.1-201ENST00000612976 329 ntBASIC5.84□□□□□ -1.47
VPS4BO75351 AL359513.1-201ENST00000614364 557 ntBASIC5.84□□□□□ -1.47
VPS4BO75351 AL031658.2-201ENST00000616850 651 ntBASIC5.84□□□□□ -1.47
VPS4BO75351 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.84□□□□□ -1.47
VPS4BO75351 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.84□□□□□ -1.47
VPS4BO75351 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.84□□□□□ -1.47
VPS4BO75351 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS4BO75351 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VPS4BO75351 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
VPS4BO75351 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS4BO75351 AL133243.2-201ENST00000610331 1621 ntBASIC5.84□□□□□ -1.47
VPS4BO75351 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS4BO75351 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VPS4BO75351 SPATA2P1-201ENST00000431223 2055 ntBASIC5.84□□□□□ -1.47
VPS4BO75351 AL161756.3-201ENST00000641216 2071 ntBASIC5.84□□□□□ -1.47
VPS4BO75351 AC091305.2-201ENST00000624049 1576 ntBASIC5.84□□□□□ -1.48
VPS4BO75351 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
VPS4BO75351 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
VPS4BO75351 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
VPS4BO75351 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VPS4BO75351 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VPS4BO75351 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS4BO75351 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
VPS4BO75351 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.83□□□□□ -1.48
VPS4BO75351 MTND4P8-201ENST00000514997 1362 ntBASIC5.83□□□□□ -1.48
VPS4BO75351 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS4BO75351 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VPS4BO75351 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VPS4BO75351 AC130304.1-201ENST00000622942 2385 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 250.2 ms