Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 RPL35AP24-201ENST00000413846 330 ntBASIC5.65□□□□□ -1.5
O00370 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.65□□□□□ -1.5
O00370 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.65□□□□□ -1.5
O00370 RPL7L1P9-201ENST00000431298 745 ntBASIC5.65□□□□□ -1.5
O00370 AC016772.1-201ENST00000444170 1261 ntBASIC5.65□□□□□ -1.5
O00370 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.65□□□□□ -1.5
O00370 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.65□□□□□ -1.5
O00370 AP000797.2-201ENST00000475768 606 ntBASIC5.65□□□□□ -1.5
O00370 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.65□□□□□ -1.5
O00370 PGAM1P13-201ENST00000507497 754 ntBASIC5.65□□□□□ -1.5
O00370 AC011411.1-201ENST00000509592 876 ntBASIC5.65□□□□□ -1.5
O00370 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
O00370 CDC42P3-201ENST00000518493 633 ntBASIC5.65□□□□□ -1.5
O00370 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.65□□□□□ -1.5
O00370 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.65□□□□□ -1.5
O00370 HNRNPRP2-201ENST00000528421 743 ntBASIC5.65□□□□□ -1.5
O00370 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.65□□□□□ -1.5
O00370 AL358913.1-201ENST00000554342 121 ntBASIC5.65□□□□□ -1.5
O00370 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.65□□□□□ -1.5
O00370 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.65□□□□□ -1.5
O00370 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.65□□□□□ -1.5
O00370 AP000864.1-201ENST00000609424 650 ntBASIC5.65□□□□□ -1.5
O00370 MIR6837-201ENST00000620884 64 ntBASIC5.65□□□□□ -1.5
O00370 AC091932.2-201ENST00000623014 291 ntBASIC5.65□□□□□ -1.5
O00370 MTCO1P1-201ENST00000624263 1081 ntBASIC5.65□□□□□ -1.5
O00370 AC079298.1-201ENST00000625026 1619 ntBASIC5.65□□□□□ -1.51
O00370 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.65□□□□□ -1.51
O00370 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.65□□□□□ -1.51
O00370 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
O00370 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
O00370 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
O00370 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
O00370 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
O00370 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.64□□□□□ -1.51
O00370 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
O00370 THAP12P5-201ENST00000405864 2275 ntBASIC5.64□□□□□ -1.51
O00370 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.64□□□□□ -1.51
O00370 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
O00370 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
O00370 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
O00370 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
O00370 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
O00370 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
O00370 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
O00370 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.64□□□□□ -1.51
O00370 SNORA51.1-201ENST00000363243 140 ntBASIC5.64□□□□□ -1.51
O00370 RNU1-149P-201ENST00000390870 161 ntBASIC5.64□□□□□ -1.51
O00370 SNORA48.4-201ENST00000391089 134 ntBASIC5.64□□□□□ -1.51
O00370 SNORA79B-201ENST00000410557 148 ntBASIC5.64□□□□□ -1.51
O00370 CTSL3P-202ENST00000412179 788 ntBASIC5.64□□□□□ -1.51
O00370 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.64□□□□□ -1.51
O00370 RPL12P43-201ENST00000420608 499 ntBASIC5.64□□□□□ -1.51
O00370 RPL7AP49-201ENST00000429522 581 ntBASIC5.64□□□□□ -1.51
O00370 AL591438.1-201ENST00000433508 581 ntBASIC5.64□□□□□ -1.51
O00370 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.64□□□□□ -1.51
O00370 RSL24D1P2-201ENST00000445584 366 ntBASIC5.64□□□□□ -1.51
O00370 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.64□□□□□ -1.51
O00370 RBMY2TP-201ENST00000451162 947 ntBASIC5.64□□□□□ -1.51
O00370 AC079168.1-201ENST00000458741 345 ntBASIC5.64□□□□□ -1.51
O00370 RPS4XP12-201ENST00000461747 709 ntBASIC5.64□□□□□ -1.51
O00370 AC021660.1-201ENST00000465006 554 ntBASIC5.64□□□□□ -1.51
O00370 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
O00370 CBX1P5-201ENST00000475330 559 ntBASIC5.64□□□□□ -1.51
O00370 AC093827.1-201ENST00000480094 861 ntBASIC5.64□□□□□ -1.51
O00370 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
O00370 RPL15P21-201ENST00000495592 567 ntBASIC5.64□□□□□ -1.51
O00370 AC016559.2-201ENST00000510759 359 ntBASIC5.64□□□□□ -1.51
O00370 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.64□□□□□ -1.51
O00370 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.64□□□□□ -1.51
O00370 AC138473.1-201ENST00000605717 526 ntBASIC5.64□□□□□ -1.51
O00370 AC109309.2-201ENST00000612597 332 ntBASIC5.64□□□□□ -1.51
O00370 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
O00370 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.64□□□□□ -1.51
O00370 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
O00370 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
O00370 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
O00370 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.64□□□□□ -1.51
O00370 MTCO1P11-201ENST00000429111 1528 ntBASIC5.64□□□□□ -1.51
O00370 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.63□□□□□ -1.51
O00370 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
O00370 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.63□□□□□ -1.51
O00370 AC005005.4-201ENST00000623789 16698 ntBASIC5.63□□□□□ -1.51
O00370 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
O00370 AC104623.2-202ENST00000623477 4002 ntBASIC5.63□□□□□ -1.51
O00370 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
O00370 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
O00370 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
O00370 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
O00370 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
O00370 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
O00370 U3.2-201ENST00000362981 210 ntBASIC5.63□□□□□ -1.51
O00370 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
O00370 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
O00370 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.63□□□□□ -1.51
O00370 FAM96AP1-201ENST00000430879 482 ntBASIC5.63□□□□□ -1.51
O00370 RPS26P39-201ENST00000469206 341 ntBASIC5.63□□□□□ -1.51
O00370 COPS8P2-201ENST00000473228 627 ntBASIC5.63□□□□□ -1.51
O00370 RPS12P31-201ENST00000491419 398 ntBASIC5.63□□□□□ -1.51
O00370 RPS24P16-201ENST00000497294 392 ntBASIC5.63□□□□□ -1.51
O00370 AC024558.1-201ENST00000505008 528 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms