Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SRRM4A7MD48 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SRRM4A7MD48 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SRRM4A7MD48 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SRRM4A7MD48 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SRRM4A7MD48 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 RNU6-249P-201ENST00000363016 102 ntBASIC4.45□□□□□ -1.7
SRRM4A7MD48 VN1R12P-201ENST00000403778 876 ntBASIC4.45□□□□□ -1.7
SRRM4A7MD48 AC099535.1-201ENST00000408928 371 ntBASIC4.45□□□□□ -1.7
SRRM4A7MD48 RN7SKP240-201ENST00000410583 375 ntBASIC4.45□□□□□ -1.7
SRRM4A7MD48 RNU4-74P-201ENST00000411280 161 ntBASIC4.45□□□□□ -1.7
SRRM4A7MD48 AC079809.1-201ENST00000415468 276 ntBASIC4.45□□□□□ -1.7
SRRM4A7MD48 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.45□□□□□ -1.7
SRRM4A7MD48 AL357078.2-201ENST00000416486 427 ntBASIC4.45□□□□□ -1.7
SRRM4A7MD48 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 AL662874.1-201ENST00000426065 230 ntBASIC4.45□□□□□ -1.7
SRRM4A7MD48 GAPDHP34-201ENST00000432112 823 ntBASIC4.45□□□□□ -1.7
SRRM4A7MD48 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 PSMC1P13-201ENST00000458195 985 ntBASIC4.45□□□□□ -1.7
SRRM4A7MD48 RN7SL741P-201ENST00000482473 289 ntBASIC4.45□□□□□ -1.7
SRRM4A7MD48 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SRRM4A7MD48 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 SNORA43.3-201ENST00000517240 103 ntBASIC4.45□□□□□ -1.7
SRRM4A7MD48 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 AC138832.1-201ENST00000522871 556 ntBASIC4.45□□□□□ -1.7
SRRM4A7MD48 AC018442.3-201ENST00000523025 183 ntBASIC4.45□□□□□ -1.7
SRRM4A7MD48 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 OSBPL9P3-201ENST00000534523 595 ntBASIC4.45□□□□□ -1.7
SRRM4A7MD48 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.45□□□□□ -1.7
SRRM4A7MD48 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 AC079148.1-201ENST00000565944 819 ntBASIC4.45□□□□□ -1.7
SRRM4A7MD48 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SRRM4A7MD48 AC020978.7-201ENST00000575953 1187 ntBASIC4.45□□□□□ -1.7
SRRM4A7MD48 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 SS18L2P2-201ENST00000583960 235 ntBASIC4.45□□□□□ -1.7
SRRM4A7MD48 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 AC002069.2-201ENST00000603580 883 ntBASIC4.45□□□□□ -1.7
SRRM4A7MD48 AP001033.2-201ENST00000609701 1003 ntBASIC4.45□□□□□ -1.7
SRRM4A7MD48 AC010632.3-201ENST00000611377 369 ntBASIC4.45□□□□□ -1.7
SRRM4A7MD48 AC084824.5-201ENST00000612009 413 ntBASIC4.45□□□□□ -1.7
SRRM4A7MD48 AC011472.4-201ENST00000615848 491 ntBASIC4.45□□□□□ -1.7
SRRM4A7MD48 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 AC106730.3-201ENST00000624568 641 ntBASIC4.45□□□□□ -1.7
SRRM4A7MD48 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SRRM4A7MD48 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SRRM4A7MD48 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SRRM4A7MD48 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SRRM4A7MD48 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SRRM4A7MD48 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SRRM4A7MD48 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SRRM4A7MD48 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 GVINP1-202ENST00000531871 7271 ntBASIC4.45□□□□□ -1.7
SRRM4A7MD48 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SRRM4A7MD48 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SRRM4A7MD48 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.45□□□□□ -1.7
SRRM4A7MD48 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SRRM4A7MD48 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
SRRM4A7MD48 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
SRRM4A7MD48 AC091305.2-201ENST00000624049 1576 ntBASIC4.44□□□□□ -1.7
SRRM4A7MD48 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.44□□□□□ -1.7
SRRM4A7MD48 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SRRM4A7MD48 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SRRM4A7MD48 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SRRM4A7MD48 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.44□□□□□ -1.7
SRRM4A7MD48 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SRRM4A7MD48 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.44□□□□□ -1.7
SRRM4A7MD48 AC002525.1-201ENST00000624392 1622 ntBASIC4.44□□□□□ -1.7
SRRM4A7MD48 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SRRM4A7MD48 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SRRM4A7MD48 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.44□□□□□ -1.7
SRRM4A7MD48 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.44□□□□□ -1.7
SRRM4A7MD48 RNA5SP187-201ENST00000384400 119 ntBASIC4.44□□□□□ -1.7
SRRM4A7MD48 RNU2-17P-201ENST00000410290 190 ntBASIC4.44□□□□□ -1.7
SRRM4A7MD48 RPL24P2-201ENST00000421023 475 ntBASIC4.44□□□□□ -1.7
SRRM4A7MD48 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.44□□□□□ -1.7
SRRM4A7MD48 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.44□□□□□ -1.7
SRRM4A7MD48 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.44□□□□□ -1.7
SRRM4A7MD48 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.44□□□□□ -1.7
SRRM4A7MD48 LRRC37A14P-201ENST00000452297 462 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms