Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
CCDC187A0A096LP49 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
CCDC187A0A096LP49 AL590763.1-201ENST00000398297 1545 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 AC117409.1-201ENST00000470499 1310 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 RNA5SP211-201ENST00000365516 117 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 SNORA70H-201ENST00000383910 135 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 SNORA70J-201ENST00000384182 135 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 MIR137-201ENST00000385223 102 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 ANAPC10P1-201ENST00000395991 556 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 AP002784.2-201ENST00000397300 549 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 AF228730.1-201ENST00000397972 663 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 SNORA79B-201ENST00000410557 148 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 GTF2IP5-201ENST00000414608 731 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 HMGB3P10-201ENST00000434734 572 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 AC092447.2-201ENST00000435487 669 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 FMO7P-201ENST00000436045 768 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 RPL7P61-201ENST00000451721 751 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 AL606490.1-201ENST00000452266 765 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 AC103563.5-201ENST00000455643 364 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 RPL21P18-201ENST00000469899 480 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 COPS8P2-201ENST00000473228 627 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 AC020779.1-201ENST00000478757 796 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 RPS3AP15-201ENST00000483874 781 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 HMGB1P38-201ENST00000490557 577 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 AC105233.1-201ENST00000498840 781 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 CCDC11P1-201ENST00000503137 1162 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 AC133963.2-201ENST00000513686 578 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 SCARNA6.1-201ENST00000516989 238 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 AP000916.1-201ENST00000533869 835 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 AC044860.2-201ENST00000561005 179 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 AC106734.1-201ENST00000568646 663 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 GARSP1-201ENST00000570895 719 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 AC068020.1-201ENST00000594215 661 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 AL606834.3-201ENST00000602615 496 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 AC130352.1-201ENST00000602979 661 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 SUMO2P14-201ENST00000604488 293 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 AP002802.2-201ENST00000605877 235 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 AC016769.4-201ENST00000616893 535 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 AC006386.1-201ENST00000619436 415 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 Z99129.2-201ENST00000619967 314 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 RPL23AP61-201ENST00000623642 466 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 YES1P1-201ENST00000418510 1628 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 AC068769.1-201ENST00000474767 2426 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 AL591135.1-201ENST00000401578 5914 ntBASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC187A0A096LP49 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC187A0A096LP49 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC187A0A096LP49 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC187A0A096LP49 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC187A0A096LP49 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC187A0A096LP49 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC187A0A096LP49 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC187A0A096LP49 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC187A0A096LP49 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC187A0A096LP49 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC187A0A096LP49 RNU6-207P-201ENST00000384137 107 ntBASIC5.57□□□□□ -1.52
CCDC187A0A096LP49 MIR1286-201ENST00000408112 78 ntBASIC5.57□□□□□ -1.52
CCDC187A0A096LP49 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
CCDC187A0A096LP49 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC187A0A096LP49 MYL6P5-201ENST00000412707 459 ntBASIC5.57□□□□□ -1.52
CCDC187A0A096LP49 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC187A0A096LP49 XKRYP4-201ENST00000414395 483 ntBASIC5.57□□□□□ -1.52
CCDC187A0A096LP49 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms