Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC7.59□□□□□ -1.19
SHANK2Q9UPX8 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SHANK2Q9UPX8 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SHANK2Q9UPX8 CASC19-260ENST00000641828 2001 ntBASIC7.59□□□□□ -1.19
SHANK2Q9UPX8 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
SHANK2Q9UPX8 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
SHANK2Q9UPX8 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC7.58□□□□□ -1.2
SHANK2Q9UPX8 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SHANK2Q9UPX8 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SHANK2Q9UPX8 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SHANK2Q9UPX8 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SHANK2Q9UPX8 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.58□□□□□ -1.2
SHANK2Q9UPX8 RNA5SP388-201ENST00000362584 119 ntBASIC7.58□□□□□ -1.2
SHANK2Q9UPX8 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC7.58□□□□□ -1.2
SHANK2Q9UPX8 AL359265.1-201ENST00000440296 795 ntBASIC7.58□□□□□ -1.2
SHANK2Q9UPX8 AC026402.1-201ENST00000513642 170 ntBASIC7.58□□□□□ -1.2
SHANK2Q9UPX8 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC7.58□□□□□ -1.2
SHANK2Q9UPX8 MTCYBP13-201ENST00000578634 1093 ntBASIC7.58□□□□□ -1.2
SHANK2Q9UPX8 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC7.58□□□□□ -1.2
SHANK2Q9UPX8 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC7.58□□□□□ -1.2
SHANK2Q9UPX8 AC010857.1-201ENST00000606398 594 ntBASIC7.58□□□□□ -1.2
SHANK2Q9UPX8 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SHANK2Q9UPX8 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC7.58□□□□□ -1.2
SHANK2Q9UPX8 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
SHANK2Q9UPX8 AL359955.1-201ENST00000455242 3275 ntBASIC7.58□□□□□ -1.2
SHANK2Q9UPX8 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SHANK2Q9UPX8 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC7.58□□□□□ -1.2
SHANK2Q9UPX8 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SHANK2Q9UPX8 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.58□□□□□ -1.2
SHANK2Q9UPX8 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SHANK2Q9UPX8 Z98755.1-201ENST00000407015 1384 ntBASIC7.57□□□□□ -1.2
SHANK2Q9UPX8 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SHANK2Q9UPX8 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
SHANK2Q9UPX8 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
SHANK2Q9UPX8 Z97832.1-201ENST00000402490 328 ntBASIC7.57□□□□□ -1.2
SHANK2Q9UPX8 AL136116.2-201ENST00000404020 785 ntBASIC7.57□□□□□ -1.2
SHANK2Q9UPX8 CHIAP3-201ENST00000423668 1133 ntBASIC7.57□□□□□ -1.2
SHANK2Q9UPX8 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC7.57□□□□□ -1.2
SHANK2Q9UPX8 AC138761.5-201ENST00000433967 325 ntBASIC7.57□□□□□ -1.2
SHANK2Q9UPX8 GAPDHP14-201ENST00000450472 937 ntBASIC7.57□□□□□ -1.2
SHANK2Q9UPX8 BX842559.2-201ENST00000451418 605 ntBASIC7.57□□□□□ -1.2
SHANK2Q9UPX8 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC7.57□□□□□ -1.2
SHANK2Q9UPX8 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC7.57□□□□□ -1.2
SHANK2Q9UPX8 AC091932.2-201ENST00000623014 291 ntBASIC7.57□□□□□ -1.2
SHANK2Q9UPX8 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC7.57□□□□□ -1.2
SHANK2Q9UPX8 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC7.57□□□□□ -1.2
SHANK2Q9UPX8 OR52H1-202ENST00000641796 1061 ntBASIC7.57□□□□□ -1.2
SHANK2Q9UPX8 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC7.57□□□□□ -1.2
SHANK2Q9UPX8 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SHANK2Q9UPX8 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
SHANK2Q9UPX8 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SHANK2Q9UPX8 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
SHANK2Q9UPX8 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 RN7SKP227-201ENST00000364445 330 ntBASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 RNA5SP223-201ENST00000365174 120 ntBASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 HYALP1-201ENST00000417674 1279 ntBASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 IGKV1OR9-1-201ENST00000424370 284 ntBASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 AC021876.1-201ENST00000425959 359 ntBASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 AC009238.2-201ENST00000431026 355 ntBASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 AURKAPS2-201ENST00000454983 333 ntBASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 AC009643.1-201ENST00000532030 391 ntBASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 RN7SL290P-201ENST00000578661 300 ntBASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 AP001521.2-201ENST00000608772 546 ntBASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 AL359757.1-201ENST00000623176 255 ntBASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC7.56□□□□□ -1.2
SHANK2Q9UPX8 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 RN7SL443P-201ENST00000464331 290 ntBASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 OR11I1P-201ENST00000486033 954 ntBASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 UBA2-208ENST00000592791 910 ntTSL 2 BASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms