Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
NPC1L1Q9UHC9 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NPC1L1Q9UHC9 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
NPC1L1Q9UHC9 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
NPC1L1Q9UHC9 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
NPC1L1Q9UHC9 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
NPC1L1Q9UHC9 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.88□□□□□ -1.31
NPC1L1Q9UHC9 RNA5SP428-201ENST00000365129 132 ntBASIC6.88□□□□□ -1.31
NPC1L1Q9UHC9 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
NPC1L1Q9UHC9 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.88□□□□□ -1.31
NPC1L1Q9UHC9 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NPC1L1Q9UHC9 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.88□□□□□ -1.31
NPC1L1Q9UHC9 NPM1P28-201ENST00000492269 840 ntBASIC6.88□□□□□ -1.31
NPC1L1Q9UHC9 RNA5SP228-201ENST00000516232 133 ntBASIC6.88□□□□□ -1.31
NPC1L1Q9UHC9 OR5AZ1P-201ENST00000527448 943 ntBASIC6.88□□□□□ -1.31
NPC1L1Q9UHC9 AC090286.3-201ENST00000573133 187 ntBASIC6.88□□□□□ -1.31
NPC1L1Q9UHC9 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.88□□□□□ -1.31
NPC1L1Q9UHC9 MIR4646-201ENST00000580775 63 ntBASIC6.88□□□□□ -1.31
NPC1L1Q9UHC9 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.88□□□□□ -1.31
NPC1L1Q9UHC9 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NPC1L1Q9UHC9 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
NPC1L1Q9UHC9 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
NPC1L1Q9UHC9 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
NPC1L1Q9UHC9 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NPC1L1Q9UHC9 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
NPC1L1Q9UHC9 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
NPC1L1Q9UHC9 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.88□□□□□ -1.31
NPC1L1Q9UHC9 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6.88□□□□□ -1.31
NPC1L1Q9UHC9 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NPC1L1Q9UHC9 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 RNU4-4P-201ENST00000364588 130 ntBASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 AL035079.1-201ENST00000405210 287 ntBASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 AL590399.4-201ENST00000436561 601 ntBASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 RPL7P11-201ENST00000437586 658 ntBASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 AL450023.3-201ENST00000440592 271 ntBASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 AC110775.1-201ENST00000513721 462 ntBASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 AC012339.2-201ENST00000523996 453 ntBASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 AP000676.2-201ENST00000529711 301 ntBASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 MIR4660-201ENST00000583549 74 ntBASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
NPC1L1Q9UHC9 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 AL139128.1-201ENST00000413921 941 ntBASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 TCEA1P1-201ENST00000449716 880 ntBASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 NMNAT1P1-201ENST00000554095 876 ntBASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 AC104785.1-201ENST00000603220 588 ntBASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 AC005377.1-201ENST00000605126 456 ntBASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 AC073575.2-201ENST00000614212 627 ntBASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 RNF123-214ENST00000629802 207 ntTSL 5 BASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 BCORP1-203ENST00000513194 5093 ntBASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NPC1L1Q9UHC9 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC6.85□□□□□ -1.31
NPC1L1Q9UHC9 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NPC1L1Q9UHC9 AC011755.1-201ENST00000623763 2049 ntBASIC6.85□□□□□ -1.31
NPC1L1Q9UHC9 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
NPC1L1Q9UHC9 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms