Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC244100.4-201ENST00000617747 388 ntBASIC4.86□□□□□ -1.63
VAPAQ9P0L0 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.86□□□□□ -1.63
VAPAQ9P0L0 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC4.86□□□□□ -1.63
VAPAQ9P0L0 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.86□□□□□ -1.63
VAPAQ9P0L0 CASC19-221ENST00000641309 1382 ntBASIC4.86□□□□□ -1.63
VAPAQ9P0L0 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VAPAQ9P0L0 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.86□□□□□ -1.63
VAPAQ9P0L0 AC011447.7-201ENST00000624228 1590 ntBASIC4.86□□□□□ -1.63
VAPAQ9P0L0 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
VAPAQ9P0L0 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.86□□□□□ -1.63
VAPAQ9P0L0 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VAPAQ9P0L0 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
VAPAQ9P0L0 STX3-208ENST00000641815 3236 ntBASIC4.85□□□□□ -1.63
VAPAQ9P0L0 OR55B1P-203ENST00000641518 2602 ntBASIC4.85□□□□□ -1.63
VAPAQ9P0L0 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
VAPAQ9P0L0 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.85□□□□□ -1.63
VAPAQ9P0L0 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
VAPAQ9P0L0 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
VAPAQ9P0L0 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.85□□□□□ -1.63
VAPAQ9P0L0 AC234781.4-201ENST00000419384 244 ntBASIC4.85□□□□□ -1.63
VAPAQ9P0L0 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.85□□□□□ -1.63
VAPAQ9P0L0 COX6CP13-201ENST00000428703 226 ntBASIC4.85□□□□□ -1.63
VAPAQ9P0L0 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.85□□□□□ -1.63
VAPAQ9P0L0 RPS29P10-201ENST00000439197 166 ntBASIC4.85□□□□□ -1.63
VAPAQ9P0L0 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VAPAQ9P0L0 AC007998.1-201ENST00000474156 672 ntBASIC4.85□□□□□ -1.63
VAPAQ9P0L0 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VAPAQ9P0L0 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.85□□□□□ -1.63
VAPAQ9P0L0 AC073073.1-201ENST00000493920 463 ntBASIC4.85□□□□□ -1.63
VAPAQ9P0L0 AC093890.1-201ENST00000502554 540 ntBASIC4.85□□□□□ -1.63
VAPAQ9P0L0 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VAPAQ9P0L0 RNU6-941P-201ENST00000516346 108 ntBASIC4.85□□□□□ -1.63
VAPAQ9P0L0 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.85□□□□□ -1.63
VAPAQ9P0L0 AC022826.1-201ENST00000519383 805 ntBASIC4.85□□□□□ -1.63
VAPAQ9P0L0 HNRNPRP2-201ENST00000528421 743 ntBASIC4.85□□□□□ -1.63
VAPAQ9P0L0 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.85□□□□□ -1.63
VAPAQ9P0L0 AC135626.1-201ENST00000556983 435 ntBASIC4.85□□□□□ -1.63
VAPAQ9P0L0 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.85□□□□□ -1.63
VAPAQ9P0L0 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VAPAQ9P0L0 AC010547.7-201ENST00000570323 333 ntBASIC4.85□□□□□ -1.63
VAPAQ9P0L0 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.85□□□□□ -1.63
VAPAQ9P0L0 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.85□□□□□ -1.63
VAPAQ9P0L0 MIR3936-201ENST00000584304 110 ntBASIC4.85□□□□□ -1.63
VAPAQ9P0L0 AP005432.2-201ENST00000608162 586 ntBASIC4.85□□□□□ -1.63
VAPAQ9P0L0 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VAPAQ9P0L0 AL359742.1-201ENST00000622497 540 ntBASIC4.85□□□□□ -1.63
VAPAQ9P0L0 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.85□□□□□ -1.63
VAPAQ9P0L0 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.85□□□□□ -1.63
VAPAQ9P0L0 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.85□□□□□ -1.63
VAPAQ9P0L0 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.85□□□□□ -1.63
VAPAQ9P0L0 TMEM30CP-203ENST00000637814 1035 ntBASIC4.85□□□□□ -1.63
VAPAQ9P0L0 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.85□□□□□ -1.63
VAPAQ9P0L0 BTBD10P1-201ENST00000549824 1352 ntBASIC4.85□□□□□ -1.63
VAPAQ9P0L0 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
VAPAQ9P0L0 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VAPAQ9P0L0 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
VAPAQ9P0L0 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.85□□□□□ -1.63
VAPAQ9P0L0 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.85□□□□□ -1.63
VAPAQ9P0L0 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.85□□□□□ -1.63
VAPAQ9P0L0 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.85□□□□□ -1.63
VAPAQ9P0L0 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VAPAQ9P0L0 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VAPAQ9P0L0 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VAPAQ9P0L0 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
VAPAQ9P0L0 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VAPAQ9P0L0 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
VAPAQ9P0L0 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VAPAQ9P0L0 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.84□□□□□ -1.63
VAPAQ9P0L0 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VAPAQ9P0L0 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.84□□□□□ -1.63
VAPAQ9P0L0 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.84□□□□□ -1.63
VAPAQ9P0L0 RNF19BPY-201ENST00000458209 1550 ntBASIC4.84□□□□□ -1.63
VAPAQ9P0L0 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VAPAQ9P0L0 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
VAPAQ9P0L0 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.84□□□□□ -1.63
VAPAQ9P0L0 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.84□□□□□ -1.63
VAPAQ9P0L0 RNA5SP284-201ENST00000384547 118 ntBASIC4.84□□□□□ -1.63
VAPAQ9P0L0 RNA5SP339-201ENST00000390987 122 ntBASIC4.84□□□□□ -1.63
VAPAQ9P0L0 AL356968.2-201ENST00000412769 1257 ntBASIC4.84□□□□□ -1.63
VAPAQ9P0L0 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.84□□□□□ -1.63
VAPAQ9P0L0 EI24P4-201ENST00000423683 1078 ntBASIC4.84□□□□□ -1.63
VAPAQ9P0L0 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC4.84□□□□□ -1.63
VAPAQ9P0L0 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.84□□□□□ -1.63
VAPAQ9P0L0 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.84□□□□□ -1.63
VAPAQ9P0L0 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.84□□□□□ -1.63
VAPAQ9P0L0 RPS11P7-201ENST00000442125 465 ntBASIC4.84□□□□□ -1.63
VAPAQ9P0L0 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.84□□□□□ -1.63
VAPAQ9P0L0 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.84□□□□□ -1.63
VAPAQ9P0L0 RPL7P6-201ENST00000480903 738 ntBASIC4.84□□□□□ -1.63
VAPAQ9P0L0 EIF1P7-201ENST00000487533 337 ntBASIC4.84□□□□□ -1.63
VAPAQ9P0L0 OR2A3P-201ENST00000493774 953 ntBASIC4.84□□□□□ -1.63
VAPAQ9P0L0 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.84□□□□□ -1.63
VAPAQ9P0L0 HMGB3P16-201ENST00000508037 287 ntBASIC4.84□□□□□ -1.63
VAPAQ9P0L0 AC012400.1-201ENST00000518452 381 ntBASIC4.84□□□□□ -1.63
VAPAQ9P0L0 RPL23AP53-201ENST00000521854 457 ntBASIC4.84□□□□□ -1.63
VAPAQ9P0L0 BNIP3P1-201ENST00000547295 580 ntBASIC4.84□□□□□ -1.63
VAPAQ9P0L0 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.84□□□□□ -1.63
VAPAQ9P0L0 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.84□□□□□ -1.63
VAPAQ9P0L0 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VAPAQ9P0L0 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms