Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VTA1Q9NP79 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VTA1Q9NP79 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
VTA1Q9NP79 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VTA1Q9NP79 AC107021.2-201ENST00000567714 2095 ntBASIC6.55□□□□□ -1.36
VTA1Q9NP79 OR9K1P-201ENST00000326513 941 ntBASIC6.55□□□□□ -1.36
VTA1Q9NP79 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VTA1Q9NP79 AL121977.1-201ENST00000401636 979 ntBASIC6.55□□□□□ -1.36
VTA1Q9NP79 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.55□□□□□ -1.36
VTA1Q9NP79 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC6.55□□□□□ -1.36
VTA1Q9NP79 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC6.55□□□□□ -1.36
VTA1Q9NP79 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.55□□□□□ -1.36
VTA1Q9NP79 AC016027.5-201ENST00000427227 210 ntBASIC6.55□□□□□ -1.36
VTA1Q9NP79 AL731534.1-201ENST00000434711 269 ntBASIC6.55□□□□□ -1.36
VTA1Q9NP79 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VTA1Q9NP79 AL009048.1-201ENST00000450437 298 ntBASIC6.55□□□□□ -1.36
VTA1Q9NP79 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC6.55□□□□□ -1.36
VTA1Q9NP79 Z95152.1-201ENST00000453556 656 ntBASIC6.55□□□□□ -1.36
VTA1Q9NP79 AC239798.3-201ENST00000454459 408 ntBASIC6.55□□□□□ -1.36
VTA1Q9NP79 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.55□□□□□ -1.36
VTA1Q9NP79 AL603882.1-201ENST00000463059 681 ntBASIC6.55□□□□□ -1.36
VTA1Q9NP79 RPL38P3-201ENST00000484463 213 ntBASIC6.55□□□□□ -1.36
VTA1Q9NP79 RN7SL184P-201ENST00000488308 297 ntBASIC6.55□□□□□ -1.36
VTA1Q9NP79 AC010374.1-201ENST00000503762 1237 ntBASIC6.55□□□□□ -1.36
VTA1Q9NP79 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC6.55□□□□□ -1.36
VTA1Q9NP79 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC6.55□□□□□ -1.36
VTA1Q9NP79 AC021678.3-201ENST00000517893 476 ntBASIC6.55□□□□□ -1.36
VTA1Q9NP79 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6.55□□□□□ -1.36
VTA1Q9NP79 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.55□□□□□ -1.36
VTA1Q9NP79 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.55□□□□□ -1.36
VTA1Q9NP79 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.55□□□□□ -1.36
VTA1Q9NP79 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.55□□□□□ -1.36
VTA1Q9NP79 CYB5AP5-201ENST00000549779 389 ntBASIC6.55□□□□□ -1.36
VTA1Q9NP79 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.55□□□□□ -1.36
VTA1Q9NP79 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC6.55□□□□□ -1.36
VTA1Q9NP79 MIR132-201ENST00000591554 101 ntBASIC6.55□□□□□ -1.36
VTA1Q9NP79 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC6.55□□□□□ -1.36
VTA1Q9NP79 AC119501.1-201ENST00000603646 475 ntBASIC6.55□□□□□ -1.36
VTA1Q9NP79 AL138960.1-201ENST00000613838 513 ntBASIC6.55□□□□□ -1.36
VTA1Q9NP79 AL390318.1-201ENST00000624564 687 ntBASIC6.55□□□□□ -1.36
VTA1Q9NP79 AP000676.4-201ENST00000624659 623 ntBASIC6.55□□□□□ -1.36
VTA1Q9NP79 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.55□□□□□ -1.36
VTA1Q9NP79 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VTA1Q9NP79 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VTA1Q9NP79 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
VTA1Q9NP79 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VTA1Q9NP79 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VTA1Q9NP79 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VTA1Q9NP79 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VTA1Q9NP79 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VTA1Q9NP79 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
VTA1Q9NP79 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.55□□□□□ -1.36
VTA1Q9NP79 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VTA1Q9NP79 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.55□□□□□ -1.36
VTA1Q9NP79 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VTA1Q9NP79 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.55□□□□□ -1.36
VTA1Q9NP79 SRRM1P3-201ENST00000426911 2678 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.54□□□□□ -1.36
VTA1Q9NP79 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
VTA1Q9NP79 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
VTA1Q9NP79 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 AL159987.1-201ENST00000347911 293 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.54□□□□□ -1.36
VTA1Q9NP79 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.54□□□□□ -1.36
VTA1Q9NP79 SSR1P2-201ENST00000415208 787 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 HIGD1AP15-201ENST00000416198 280 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
VTA1Q9NP79 XKRYP1-201ENST00000423438 492 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.54□□□□□ -1.36
VTA1Q9NP79 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.54□□□□□ -1.36
VTA1Q9NP79 NDUFA5P10-201ENST00000432147 357 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 XKRYP2-201ENST00000432915 492 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 PA2G4P6-201ENST00000438325 1197 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.54□□□□□ -1.36
VTA1Q9NP79 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC6.54□□□□□ -1.36
VTA1Q9NP79 AL450996.1-201ENST00000445574 1202 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 AC069540.1-201ENST00000446320 988 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 AC092685.1-201ENST00000447960 1243 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC6.54□□□□□ -1.36
VTA1Q9NP79 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC6.54□□□□□ -1.36
VTA1Q9NP79 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.54□□□□□ -1.36
VTA1Q9NP79 RN7SL570P-201ENST00000484405 292 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 RPL32P33-201ENST00000487023 394 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 AC020699.1-201ENST00000505161 445 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC6.54□□□□□ -1.36
VTA1Q9NP79 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.54□□□□□ -1.36
VTA1Q9NP79 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.54□□□□□ -1.36
VTA1Q9NP79 RNA5SP34-201ENST00000516887 130 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.54□□□□□ -1.36
VTA1Q9NP79 AC139365.2-201ENST00000517972 253 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 AC091163.3-201ENST00000518269 1144 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.54□□□□□ -1.36
VTA1Q9NP79 AC027026.1-201ENST00000532323 742 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC6.54□□□□□ -1.36
VTA1Q9NP79 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.54□□□□□ -1.36
VTA1Q9NP79 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.54□□□□□ -1.36
VTA1Q9NP79 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC6.54□□□□□ -1.36
VTA1Q9NP79 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC6.54□□□□□ -1.36
VTA1Q9NP79 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms