Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 RN7SKP202-201ENST00000410439 330 ntBASIC4.83□□□□□ -1.64
CHD8Q9HCK8 VN1R51P-201ENST00000411675 945 ntBASIC4.83□□□□□ -1.64
CHD8Q9HCK8 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 RPL34P6-201ENST00000432390 345 ntBASIC4.83□□□□□ -1.64
CHD8Q9HCK8 AL596266.1-201ENST00000448132 400 ntBASIC4.83□□□□□ -1.64
CHD8Q9HCK8 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 AC007016.1-201ENST00000512110 244 ntBASIC4.83□□□□□ -1.64
CHD8Q9HCK8 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 AC090948.1-201ENST00000607464 549 ntBASIC4.83□□□□□ -1.64
CHD8Q9HCK8 AC021422.1-201ENST00000621212 473 ntBASIC4.83□□□□□ -1.64
CHD8Q9HCK8 AC002044.3-201ENST00000623314 541 ntBASIC4.83□□□□□ -1.64
CHD8Q9HCK8 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 AC120338.1-201ENST00000625074 1541 ntBASIC4.83□□□□□ -1.64
CHD8Q9HCK8 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 RSU1P1-201ENST00000453416 441 ntBASIC4.83□□□□□ -1.64
CHD8Q9HCK8 AC010326.1-201ENST00000462726 602 ntBASIC4.83□□□□□ -1.64
CHD8Q9HCK8 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 AGGF1P7-201ENST00000562369 913 ntBASIC4.83□□□□□ -1.64
CHD8Q9HCK8 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC4.82□□□□□ -1.64
CHD8Q9HCK8 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
CHD8Q9HCK8 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC4.82□□□□□ -1.64
CHD8Q9HCK8 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHD8Q9HCK8 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.82□□□□□ -1.64
CHD8Q9HCK8 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHD8Q9HCK8 OR5P1P-201ENST00000299512 925 ntBASIC4.82□□□□□ -1.64
CHD8Q9HCK8 RNA5SP326-201ENST00000363209 110 ntBASIC4.82□□□□□ -1.64
CHD8Q9HCK8 MIR105-1-201ENST00000385222 81 ntBASIC4.82□□□□□ -1.64
CHD8Q9HCK8 AK3P5-201ENST00000432033 519 ntBASIC4.82□□□□□ -1.64
CHD8Q9HCK8 RPS29P9-201ENST00000440360 171 ntBASIC4.82□□□□□ -1.64
CHD8Q9HCK8 OR52J1P-201ENST00000450596 932 ntBASIC4.82□□□□□ -1.64
CHD8Q9HCK8 AC010733.1-201ENST00000451515 401 ntBASIC4.82□□□□□ -1.64
CHD8Q9HCK8 GMPSP1-201ENST00000514075 579 ntBASIC4.82□□□□□ -1.64
CHD8Q9HCK8 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.82□□□□□ -1.64
CHD8Q9HCK8 AC004944.1-201ENST00000517807 3059 ntBASIC4.82□□□□□ -1.64
CHD8Q9HCK8 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CHD8Q9HCK8 AL021877.2-201ENST00000624442 10684 ntBASIC4.82□□□□□ -1.64
CHD8Q9HCK8 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC4.82□□□□□ -1.64
CHD8Q9HCK8 AL359955.1-201ENST00000455242 3275 ntBASIC4.82□□□□□ -1.64
CHD8Q9HCK8 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHD8Q9HCK8 RNA5SP251-201ENST00000410614 137 ntBASIC4.82□□□□□ -1.64
CHD8Q9HCK8 RPL12P43-201ENST00000420608 499 ntBASIC4.82□□□□□ -1.64
CHD8Q9HCK8 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.82□□□□□ -1.64
CHD8Q9HCK8 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.82□□□□□ -1.64
CHD8Q9HCK8 AL356390.1-201ENST00000455684 397 ntBASIC4.82□□□□□ -1.64
CHD8Q9HCK8 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.82□□□□□ -1.64
CHD8Q9HCK8 RN7SL319P-201ENST00000480656 221 ntBASIC4.82□□□□□ -1.64
CHD8Q9HCK8 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.82□□□□□ -1.64
CHD8Q9HCK8 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC4.82□□□□□ -1.64
CHD8Q9HCK8 MIR132-201ENST00000591554 101 ntBASIC4.82□□□□□ -1.64
CHD8Q9HCK8 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.82□□□□□ -1.64
CHD8Q9HCK8 AP005131.7-201ENST00000610087 611 ntBASIC4.82□□□□□ -1.64
CHD8Q9HCK8 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHD8Q9HCK8 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CHD8Q9HCK8 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.82□□□□□ -1.64
CHD8Q9HCK8 NBPF8-201ENST00000583271 5330 ntBASIC4.82□□□□□ -1.64
CHD8Q9HCK8 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.82□□□□□ -1.64
CHD8Q9HCK8 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CHD8Q9HCK8 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CHD8Q9HCK8 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 PARN-201ENST00000341484 2100 ntTSL 2 BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 AC114814.2-201ENST00000419195 485 ntBASIC4.81□□□□□ -1.64
CHD8Q9HCK8 KRR1P1-201ENST00000419430 803 ntBASIC4.81□□□□□ -1.64
CHD8Q9HCK8 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 VN1R21P-201ENST00000426703 765 ntBASIC4.81□□□□□ -1.64
CHD8Q9HCK8 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 AC016831.4-201ENST00000438302 307 ntBASIC4.81□□□□□ -1.64
CHD8Q9HCK8 CEACAMP6-201ENST00000452007 574 ntBASIC4.81□□□□□ -1.64
CHD8Q9HCK8 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 RN7SKP276-201ENST00000516242 268 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms