Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 AC006206.1-201ENST00000544842 3387 ntBASIC5.41□□□□□ -1.54
BRF2Q9HAW0 NLRP3P1-201ENST00000622303 1785 ntBASIC5.41□□□□□ -1.54
BRF2Q9HAW0 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.41□□□□□ -1.54
BRF2Q9HAW0 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 MTCO1P4-201ENST00000520516 1409 ntBASIC5.4□□□□□ -1.54
BRF2Q9HAW0 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
BRF2Q9HAW0 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
BRF2Q9HAW0 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
BRF2Q9HAW0 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
BRF2Q9HAW0 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.4□□□□□ -1.54
BRF2Q9HAW0 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
BRF2Q9HAW0 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
BRF2Q9HAW0 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
BRF2Q9HAW0 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
BRF2Q9HAW0 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
BRF2Q9HAW0 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
BRF2Q9HAW0 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.4□□□□□ -1.54
BRF2Q9HAW0 RPS6P23-201ENST00000413224 722 ntBASIC5.4□□□□□ -1.54
BRF2Q9HAW0 AC105402.1-201ENST00000413336 545 ntBASIC5.4□□□□□ -1.54
BRF2Q9HAW0 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.4□□□□□ -1.54
BRF2Q9HAW0 DPY19L1P2-201ENST00000426647 915 ntBASIC5.4□□□□□ -1.54
BRF2Q9HAW0 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.4□□□□□ -1.54
BRF2Q9HAW0 BX323845.3-201ENST00000428215 527 ntBASIC5.4□□□□□ -1.54
BRF2Q9HAW0 NPM1P18-201ENST00000434232 732 ntBASIC5.4□□□□□ -1.54
BRF2Q9HAW0 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.4□□□□□ -1.54
BRF2Q9HAW0 AP000936.3-201ENST00000438127 255 ntBASIC5.4□□□□□ -1.54
BRF2Q9HAW0 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.4□□□□□ -1.54
BRF2Q9HAW0 RNFT1P2-201ENST00000443064 757 ntBASIC5.4□□□□□ -1.54
BRF2Q9HAW0 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.4□□□□□ -1.54
BRF2Q9HAW0 RPL34P26-201ENST00000445636 354 ntBASIC5.4□□□□□ -1.54
BRF2Q9HAW0 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
BRF2Q9HAW0 RNU7-27P-201ENST00000459281 62 ntBASIC5.4□□□□□ -1.54
BRF2Q9HAW0 RN7SL168P-201ENST00000463821 279 ntBASIC5.4□□□□□ -1.54
BRF2Q9HAW0 RN7SL205P-201ENST00000490174 284 ntBASIC5.4□□□□□ -1.54
BRF2Q9HAW0 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.4□□□□□ -1.54
BRF2Q9HAW0 RNA5SP473-201ENST00000516402 125 ntBASIC5.4□□□□□ -1.54
BRF2Q9HAW0 SNORA70.20-201ENST00000516848 126 ntBASIC5.4□□□□□ -1.54
BRF2Q9HAW0 HMGB1P42-201ENST00000532126 553 ntBASIC5.4□□□□□ -1.54
BRF2Q9HAW0 AC024405.1-201ENST00000532521 1042 ntBASIC5.4□□□□□ -1.54
BRF2Q9HAW0 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.4□□□□□ -1.54
BRF2Q9HAW0 AC008083.2-201ENST00000546707 476 ntBASIC5.4□□□□□ -1.54
BRF2Q9HAW0 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.4□□□□□ -1.54
BRF2Q9HAW0 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.4□□□□□ -1.54
BRF2Q9HAW0 HSPE1P2-201ENST00000554777 306 ntBASIC5.4□□□□□ -1.54
BRF2Q9HAW0 AC107958.1-201ENST00000556576 290 ntBASIC5.4□□□□□ -1.54
BRF2Q9HAW0 AL109741.3-201ENST00000561748 592 ntBASIC5.4□□□□□ -1.54
BRF2Q9HAW0 AC018552.1-201ENST00000562099 811 ntBASIC5.4□□□□□ -1.54
BRF2Q9HAW0 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.4□□□□□ -1.54
BRF2Q9HAW0 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.4□□□□□ -1.54
BRF2Q9HAW0 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
BRF2Q9HAW0 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
BRF2Q9HAW0 BNIP3P31-201ENST00000604515 566 ntBASIC5.4□□□□□ -1.54
BRF2Q9HAW0 AC007786.3-201ENST00000615154 596 ntBASIC5.4□□□□□ -1.54
BRF2Q9HAW0 RN7SL544P-201ENST00000617232 284 ntBASIC5.4□□□□□ -1.54
BRF2Q9HAW0 RN7SL763P-201ENST00000620922 284 ntBASIC5.4□□□□□ -1.54
BRF2Q9HAW0 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.4□□□□□ -1.54
BRF2Q9HAW0 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.4□□□□□ -1.54
BRF2Q9HAW0 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.4□□□□□ -1.54
BRF2Q9HAW0 AC087516.1-201ENST00000561236 2428 ntBASIC5.4□□□□□ -1.55
BRF2Q9HAW0 PWAR1-201ENST00000624188 2414 ntBASIC5.4□□□□□ -1.55
BRF2Q9HAW0 SSXP3-201ENST00000442971 1300 ntBASIC5.4□□□□□ -1.55
BRF2Q9HAW0 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.4□□□□□ -1.55
BRF2Q9HAW0 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
BRF2Q9HAW0 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.4□□□□□ -1.55
BRF2Q9HAW0 AC007938.2-201ENST00000604666 2634 ntBASIC5.4□□□□□ -1.55
BRF2Q9HAW0 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.4□□□□□ -1.55
BRF2Q9HAW0 CASC19-260ENST00000641828 2001 ntBASIC5.4□□□□□ -1.55
BRF2Q9HAW0 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
BRF2Q9HAW0 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 GAPDHP24-201ENST00000328713 983 ntBASIC5.39□□□□□ -1.55
BRF2Q9HAW0 SNORA64.1-201ENST00000362600 132 ntBASIC5.39□□□□□ -1.55
BRF2Q9HAW0 RNU6-185P-201ENST00000384421 107 ntBASIC5.39□□□□□ -1.55
BRF2Q9HAW0 RNU6-244P-201ENST00000391028 104 ntBASIC5.39□□□□□ -1.55
BRF2Q9HAW0 RPS27AP11-201ENST00000402798 447 ntBASIC5.39□□□□□ -1.55
BRF2Q9HAW0 XKRYP4-201ENST00000414395 483 ntBASIC5.39□□□□□ -1.55
BRF2Q9HAW0 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 AC066692.1-201ENST00000421721 457 ntBASIC5.39□□□□□ -1.55
BRF2Q9HAW0 MTCO2P1-201ENST00000424648 477 ntBASIC5.39□□□□□ -1.55
BRF2Q9HAW0 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 AL035458.1-201ENST00000433096 585 ntBASIC5.39□□□□□ -1.55
BRF2Q9HAW0 YWHAZP2-201ENST00000440317 728 ntBASIC5.39□□□□□ -1.55
BRF2Q9HAW0 RNF2P1-201ENST00000442955 1010 ntBASIC5.39□□□□□ -1.55
BRF2Q9HAW0 RPL6P5-201ENST00000445678 828 ntBASIC5.39□□□□□ -1.55
BRF2Q9HAW0 AC092685.1-201ENST00000447960 1243 ntBASIC5.39□□□□□ -1.55
BRF2Q9HAW0 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.39□□□□□ -1.55
BRF2Q9HAW0 XKRYP5-201ENST00000449659 483 ntBASIC5.39□□□□□ -1.55
BRF2Q9HAW0 AC108751.3-201ENST00000461814 1020 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms