Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 GLRA4-201ENST00000372617 1795 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 RNU6-1155P-201ENST00000363554 107 ntBASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 Y_RNA.634-201ENST00000364811 113 ntBASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 Y_RNA.344-201ENST00000365381 112 ntBASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 ARF1P2-201ENST00000392493 538 ntBASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 RNU6-141P-201ENST00000410499 105 ntBASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 RPL15P13-201ENST00000414329 645 ntBASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 RPL32P35-201ENST00000415214 394 ntBASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 SWI5-203ENST00000418976 763 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 LINC00486-202ENST00000424364 691 ntTSL 5 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 AL050331.1-201ENST00000435100 623 ntBASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 AL078601.1-201ENST00000444542 271 ntBASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 AL138895.1-201ENST00000448674 173 ntTSL 3 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 KRT42P-203ENST00000458343 671 ntBASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 AC007215.1-201ENST00000464893 276 ntBASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 RN7SL255P-201ENST00000470639 296 ntBASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 RN7SL211P-201ENST00000485246 276 ntBASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 RN7SL629P-201ENST00000489622 285 ntBASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 FAM86KP-201ENST00000509817 987 ntBASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 GUCY1A3-207ENST00000511108 2992 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 AC011406.1-201ENST00000512440 370 ntBASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 AC138956.2-201ENST00000512934 528 ntTSL 5 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 RNA5SP154-201ENST00000516193 111 ntBASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 RPL10P8-201ENST00000522888 313 ntBASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 IGLCOR22-1-201ENST00000523725 316 ntBASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 LY6E-215ENST00000523847 427 ntTSL 3 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 AP001922.6-201ENST00000532553 546 ntTSL 5 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 AC079313.1-201ENST00000552785 546 ntTSL 4 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 PIGHP1-201ENST00000558833 565 ntBASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 AC018552.4-201ENST00000563251 556 ntTSL 4 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 AC011471.2-201ENST00000588192 523 ntTSL 4 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 CALM3-206ENST00000594523 540 ntTSL 4 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 AL356575.1-201ENST00000603008 283 ntBASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 AL078624.2-201ENST00000605063 554 ntBASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 RN7SL760P-201ENST00000607344 270 ntBASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 AL021707.8-201ENST00000609428 183 ntBASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 AC211433.3-201ENST00000623770 375 ntBASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 AL359644.1-201ENST00000635872 471 ntTSL 3 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 5_8S_rRNA.4-201ENST00000636054 151 ntBASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 AC099654.15-201ENST00000639802 509 ntBASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 CD74-201ENST00000009530 981 ntAPPRIS P2 TSL 2 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 ZNF491-201ENST00000323169 2471 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 CLGN-202ENST00000414773 2820 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 RIMS2-207ENST00000504942 4228 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 CD22-205ENST00000544992 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 ZNF610-203ENST00000403906 2191 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 EXOC1-203ENST00000381295 3551 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 MYO1F-222ENST00000613525 4296 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 ITGBL1-205ENST00000545560 4808 ntTSL 2 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 PARP8-220ENST00000514342 2384 ntTSL 5 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 PALB2-206ENST00000568219 3963 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 CX3CR1-205ENST00000541347 3255 ntAPPRIS P1 TSL 4 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 ZSCAN31-214ENST00000446474 2562 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 PTAFR-203ENST00000539896 4191 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 DCTN1-227ENST00000633691 4160 ntTSL 5 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 HBS1L-203ENST00000367822 2793 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 CUX1-205ENST00000425244 2776 ntTSL 2 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 UQCC1-205ENST00000374385 2447 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 MICAL3-202ENST00000383094 2963 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 CSGALNACT2-201ENST00000374466 3730 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 HADHAP2-201ENST00000540341 2285 ntBASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 CHRM3-207ENST00000615928 2294 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 OTUB2-201ENST00000203664 3922 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 EPB41-203ENST00000349460 3029 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 SVIP-201ENST00000354193 4541 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 USP6NL-202ENST00000379237 4546 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 PTCH1-203ENST00000375274 4720 ntTSL 5 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 MAP3K7-204ENST00000369329 4911 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 CREB3L4-201ENST00000271889 1750 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 RAD9B-205ENST00000409425 2727 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 HS3ST5-202ENST00000411826 2744 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 MAP3K13-210ENST00000446828 2737 ntTSL 2 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 SIGLEC8-201ENST00000321424 2949 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 MED22-210ENST00000614493 3886 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 AC092279.2-201ENST00000623742 2189 ntBASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 CSPG4P10-201ENST00000456932 4817 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 231 ms