Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC7.72□□□□□ -1.17
SCAPERQ9BY12 TRIM60P9Y-201ENST00000438459 816 ntBASIC7.72□□□□□ -1.17
SCAPERQ9BY12 AC073465.2-201ENST00000440938 498 ntBASIC7.72□□□□□ -1.17
SCAPERQ9BY12 TRIM60P11Y-201ENST00000445313 801 ntBASIC7.72□□□□□ -1.17
SCAPERQ9BY12 AC010326.1-201ENST00000462726 602 ntBASIC7.72□□□□□ -1.17
SCAPERQ9BY12 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC7.72□□□□□ -1.17
SCAPERQ9BY12 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC7.72□□□□□ -1.17
SCAPERQ9BY12 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC7.72□□□□□ -1.17
SCAPERQ9BY12 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC7.72□□□□□ -1.17
SCAPERQ9BY12 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC7.72□□□□□ -1.17
SCAPERQ9BY12 AC020937.1-201ENST00000519677 1013 ntBASIC7.72□□□□□ -1.17
SCAPERQ9BY12 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC7.72□□□□□ -1.17
SCAPERQ9BY12 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC7.72□□□□□ -1.17
SCAPERQ9BY12 AL110118.1-201ENST00000553543 400 ntBASIC7.72□□□□□ -1.17
SCAPERQ9BY12 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC7.72□□□□□ -1.17
SCAPERQ9BY12 AC020910.3-201ENST00000603701 874 ntBASIC7.72□□□□□ -1.17
SCAPERQ9BY12 AC006338.2-201ENST00000616864 791 ntBASIC7.72□□□□□ -1.17
SCAPERQ9BY12 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.72□□□□□ -1.17
SCAPERQ9BY12 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
SCAPERQ9BY12 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC7.72□□□□□ -1.17
SCAPERQ9BY12 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
SCAPERQ9BY12 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SCAPERQ9BY12 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC7.72□□□□□ -1.17
SCAPERQ9BY12 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SCAPERQ9BY12 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SCAPERQ9BY12 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.72□□□□□ -1.17
SCAPERQ9BY12 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SCAPERQ9BY12 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SCAPERQ9BY12 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SCAPERQ9BY12 KYNUP3-201ENST00000574386 1341 ntBASIC7.71□□□□□ -1.17
SCAPERQ9BY12 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
SCAPERQ9BY12 AC003973.3-201ENST00000624863 2822 ntBASIC7.71□□□□□ -1.17
SCAPERQ9BY12 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC7.71□□□□□ -1.17
SCAPERQ9BY12 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC7.71□□□□□ -1.17
SCAPERQ9BY12 AC124944.2-201ENST00000429866 1242 ntBASIC7.71□□□□□ -1.17
SCAPERQ9BY12 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
SCAPERQ9BY12 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC7.71□□□□□ -1.17
SCAPERQ9BY12 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
SCAPERQ9BY12 AP001880.2-201ENST00000538233 448 ntBASIC7.71□□□□□ -1.17
SCAPERQ9BY12 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC7.71□□□□□ -1.17
SCAPERQ9BY12 MIR4715-201ENST00000584117 79 ntBASIC7.71□□□□□ -1.17
SCAPERQ9BY12 AP001521.2-201ENST00000608772 546 ntBASIC7.71□□□□□ -1.17
SCAPERQ9BY12 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC7.71□□□□□ -1.17
SCAPERQ9BY12 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
SCAPERQ9BY12 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
SCAPERQ9BY12 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
SCAPERQ9BY12 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SCAPERQ9BY12 DHX40P1-201ENST00000588725 1412 ntBASIC7.71□□□□□ -1.18
SCAPERQ9BY12 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SCAPERQ9BY12 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC7.71□□□□□ -1.18
SCAPERQ9BY12 KARSP3-201ENST00000571212 1504 ntBASIC7.71□□□□□ -1.18
SCAPERQ9BY12 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SCAPERQ9BY12 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
SCAPERQ9BY12 AC004975.1-201ENST00000428733 208 ntBASIC7.7□□□□□ -1.18
SCAPERQ9BY12 AURKAPS2-201ENST00000454983 333 ntBASIC7.7□□□□□ -1.18
SCAPERQ9BY12 RPL7AP28-201ENST00000464513 571 ntBASIC7.7□□□□□ -1.18
SCAPERQ9BY12 AC007537.2-201ENST00000472093 511 ntBASIC7.7□□□□□ -1.18
SCAPERQ9BY12 RN7SL41P-201ENST00000476144 297 ntBASIC7.7□□□□□ -1.18
SCAPERQ9BY12 AC020779.1-201ENST00000478757 796 ntBASIC7.7□□□□□ -1.18
SCAPERQ9BY12 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC7.7□□□□□ -1.18
SCAPERQ9BY12 AC097173.1-201ENST00000505862 819 ntBASIC7.7□□□□□ -1.18
SCAPERQ9BY12 MIR4277-201ENST00000578298 84 ntBASIC7.7□□□□□ -1.18
SCAPERQ9BY12 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SCAPERQ9BY12 AC015712.7-201ENST00000615211 635 ntBASIC7.7□□□□□ -1.18
SCAPERQ9BY12 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
SCAPERQ9BY12 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC7.7□□□□□ -1.18
SCAPERQ9BY12 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC7.7□□□□□ -1.18
SCAPERQ9BY12 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC7.7□□□□□ -1.18
SCAPERQ9BY12 AC079097.1-201ENST00000512187 1399 ntBASIC7.7□□□□□ -1.18
SCAPERQ9BY12 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC7.7□□□□□ -1.18
SCAPERQ9BY12 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
SCAPERQ9BY12 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SCAPERQ9BY12 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SCAPERQ9BY12 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
SCAPERQ9BY12 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC7.69□□□□□ -1.18
SCAPERQ9BY12 AL161722.2-201ENST00000434731 981 ntBASIC7.69□□□□□ -1.18
SCAPERQ9BY12 REG1CP-206ENST00000447469 496 ntBASIC7.69□□□□□ -1.18
SCAPERQ9BY12 TCEA1P1-201ENST00000449716 880 ntBASIC7.69□□□□□ -1.18
SCAPERQ9BY12 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC7.69□□□□□ -1.18
SCAPERQ9BY12 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC7.69□□□□□ -1.18
SCAPERQ9BY12 AC021106.3-201ENST00000623925 531 ntBASIC7.69□□□□□ -1.18
SCAPERQ9BY12 AP001153.1-201ENST00000641024 338 ntBASIC7.69□□□□□ -1.18
SCAPERQ9BY12 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
SCAPERQ9BY12 AC093297.3-201ENST00000607056 2517 ntBASIC7.69□□□□□ -1.18
SCAPERQ9BY12 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SCAPERQ9BY12 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC7.69□□□□□ -1.18
SCAPERQ9BY12 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SCAPERQ9BY12 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SCAPERQ9BY12 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC7.69□□□□□ -1.18
SCAPERQ9BY12 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
SCAPERQ9BY12 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC7.69□□□□□ -1.18
SCAPERQ9BY12 AC016745.2-201ENST00000608834 3443 ntBASIC7.69□□□□□ -1.18
SCAPERQ9BY12 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SCAPERQ9BY12 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SCAPERQ9BY12 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
SCAPERQ9BY12 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SCAPERQ9BY12 AP000641.1-201ENST00000531988 1639 ntBASIC7.69□□□□□ -1.18
SCAPERQ9BY12 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC7.69□□□□□ -1.18
SCAPERQ9BY12 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SCAPERQ9BY12 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms