Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 LGALS8-202ENST00000323938 1855 ntTSL 5 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 SPATA31A6-201ENST00000332857 4209 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
USB1Q9BQ65 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
USB1Q9BQ65 RNU6-952P-201ENST00000391164 108 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 AC092642.1-201ENST00000392417 425 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 FDPSP5-201ENST00000399474 1057 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 U3.34-201ENST00000408198 212 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 RNU6-370P-201ENST00000411008 104 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 RPE-204ENST00000411934 792 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
USB1Q9BQ65 AC002367.1-201ENST00000416765 405 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 HMGB3P10-201ENST00000434734 572 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 RPL23AP19-201ENST00000436229 369 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 AL023584.1-201ENST00000437067 349 ntTSL 3 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 DDX3P2-201ENST00000446138 111 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 AL021154.1-201ENST00000451217 456 ntTSL 3 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 AL109809.3-201ENST00000456875 246 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 PPIAP28-201ENST00000458378 485 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 TAAR3P-201ENST00000466706 1078 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 AC117395.3-201ENST00000471176 680 ntTSL 4 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 TAAR3P-202ENST00000481759 1025 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 RN7SL65P-201ENST00000485221 315 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 AC083904.1-201ENST00000487828 231 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 AC114964.1-201ENST00000502306 1111 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 GAPDHP61-201ENST00000507324 1005 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 FAM206BP-201ENST00000510179 541 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 RNU4-29P-201ENST00000515943 174 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 NARSP2-201ENST00000518524 679 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 KCTD21-AS1-204ENST00000528468 554 ntTSL 4 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 ST3GAL4-219ENST00000534457 987 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
USB1Q9BQ65 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 AC068831.4-201ENST00000556118 109 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 AC125421.2-201ENST00000580370 583 ntTSL 4 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 AC098848.2-201ENST00000588023 330 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 AC018690.1-201ENST00000608144 626 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 AC016876.3-201ENST00000610459 426 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 AL136097.3-201ENST00000611097 505 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 PTCHD3P1-201ENST00000612350 537 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 AP000356.4-201ENST00000639500 172 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 XAF1-202ENST00000361842 3623 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
USB1Q9BQ65 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
USB1Q9BQ65 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
USB1Q9BQ65 AC068733.2-201ENST00000605434 1418 ntBASIC7.33□□□□□ -1.24
USB1Q9BQ65 CALCOCO2-201ENST00000258947 3682 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
USB1Q9BQ65 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC7.33□□□□□ -1.24
USB1Q9BQ65 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USB1Q9BQ65 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USB1Q9BQ65 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USB1Q9BQ65 ZNF652P1-201ENST00000442420 1309 ntBASIC7.32□□□□□ -1.24
USB1Q9BQ65 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 ASAP1-IT2-201ENST00000626977 2031 ntBASIC7.32□□□□□ -1.24
USB1Q9BQ65 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USB1Q9BQ65 MMP13-202ENST00000340273 1470 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
USB1Q9BQ65 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USB1Q9BQ65 PAX8-AS1-201ENST00000333145 2319 ntTSL 2 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 TAB3P1-202ENST00000452645 1634 ntBASIC7.32□□□□□ -1.24
USB1Q9BQ65 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 Y_RNA.176-201ENST00000363815 109 ntBASIC7.32□□□□□ -1.24
USB1Q9BQ65 TRAJ24-201ENST00000390513 63 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 AL034417.1-201ENST00000399343 800 ntBASIC7.32□□□□□ -1.24
USB1Q9BQ65 MORF4L1P1-201ENST00000404582 967 ntBASIC7.32□□□□□ -1.24
USB1Q9BQ65 RN7SKP247-201ENST00000411094 308 ntBASIC7.32□□□□□ -1.24
USB1Q9BQ65 AC007283.2-201ENST00000424739 197 ntBASIC7.32□□□□□ -1.24
USB1Q9BQ65 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 PRPF38AP2-201ENST00000438179 851 ntBASIC7.32□□□□□ -1.24
USB1Q9BQ65 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 AC079781.2-201ENST00000446424 169 ntBASIC7.32□□□□□ -1.24
USB1Q9BQ65 OR7E102P-201ENST00000448855 1015 ntBASIC7.32□□□□□ -1.24
USB1Q9BQ65 AC073415.1-201ENST00000449240 153 ntBASIC7.32□□□□□ -1.24
USB1Q9BQ65 LINC01007-203ENST00000451953 579 ntTSL 4 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 AC012501.1-201ENST00000454312 555 ntTSL 4 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 AC123768.1-202ENST00000460684 461 ntTSL 3 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 RN7SL496P-201ENST00000470372 290 ntBASIC7.32□□□□□ -1.24
USB1Q9BQ65 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 Y_RNA.665-201ENST00000516177 98 ntBASIC7.32□□□□□ -1.24
USB1Q9BQ65 RNU6-764P-201ENST00000516396 105 ntBASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms